Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AC026241.1-201ENST00000517873 2142 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AC073429.2-201ENST00000569694 1444 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 SNORA80E-201ENST00000384744 137 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 RNU11-4P-201ENST00000391149 133 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 SNORA11.3-201ENST00000408471 128 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 RN7SKP293-201ENST00000411389 296 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AC092447.6-201ENST00000414578 210 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AL513477.1-202ENST00000417061 214 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 RPS27AP7-201ENST00000422792 455 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 OR51AB1P-201ENST00000429046 620 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 VN1R34P-201ENST00000447387 883 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 TRY2P-201ENST00000448860 689 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 BX276092.4-201ENST00000452056 248 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 HMGB1P15-201ENST00000453854 435 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AC034236.1-201ENST00000469891 373 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 RPS23P3-201ENST00000470993 430 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AC010301.1-201ENST00000473936 355 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 OR2AO1P-201ENST00000476497 403 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 GAPDHP39-201ENST00000481866 979 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 HMGB1P22-201ENST00000505315 124 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AC112198.1-201ENST00000505369 1220 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AC008565.1-201ENST00000509046 885 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 RN7SKP40-201ENST00000517211 242 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 TBCA-206ENST00000518338 551 ntTSL 2 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AC008083.2-201ENST00000546707 476 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AC022404.1-201ENST00000555320 273 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 NDUFA5P11-201ENST00000567995 343 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AC067852.3-201ENST00000589177 561 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 TPMTP1-201ENST00000592307 737 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 SNORA11.6-201ENST00000619030 128 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AL356321.1-201ENST00000621360 228 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 AC124944.3-204ENST00000641191 150 ntBASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
LINC01558Q9Y6Z2 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AL139276.1-201ENST00000311910 1001 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 SNORD113.2-201ENST00000364166 89 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 RNVU1-3-201ENST00000364313 161 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 SNORA67.1-201ENST00000364749 141 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 RNU1-64P-201ENST00000365443 163 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 OR6K3-202ENST00000368146 996 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 CHMP1B2P-201ENST00000399581 597 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 RNA5SP38-201ENST00000410750 119 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 RPL35AP24-201ENST00000413846 330 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC080125.1-201ENST00000414888 684 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC245054.1-201ENST00000420944 258 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 APCDD1L-AS1-204ENST00000427794 461 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 BTF3P10-201ENST00000433415 495 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AL022324.2-201ENST00000434827 780 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 RPL36AP39-201ENST00000445859 318 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AP002345.1-201ENST00000456493 928 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 RPS17P11-201ENST00000474297 293 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC011005.3-201ENST00000491624 395 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 RN7SL810P-201ENST00000493031 276 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC135721.1-201ENST00000497954 479 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC108475.1-201ENST00000507880 950 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC008716.1-201ENST00000511084 513 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 RNU1-104P-201ENST00000517280 175 ntBASIC1.59□□□□□ -2.15
LINC01558Q9Y6Z2 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms