Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHGA1Q9Y5H4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDHGA1Q9Y5H4 AC007687.1-201ENST00000602704 304 ntBASIC4.03□□□□□ -1.76
PCDHGA1Q9Y5H4 AC002487.1-201ENST00000604565 994 ntBASIC4.03□□□□□ -1.76
PCDHGA1Q9Y5H4 IGHV3-29-201ENST00000604817 344 ntBASIC4.03□□□□□ -1.76
PCDHGA1Q9Y5H4 AL391834.2-201ENST00000609982 546 ntBASIC4.03□□□□□ -1.76
PCDHGA1Q9Y5H4 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA1Q9Y5H4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA1Q9Y5H4 MIR7151-201ENST00000617477 60 ntBASIC4.03□□□□□ -1.76
PCDHGA1Q9Y5H4 AC068722.2-201ENST00000618734 544 ntBASIC4.03□□□□□ -1.76
PCDHGA1Q9Y5H4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PCDHGA1Q9Y5H4 AL354798.1-201ENST00000622505 329 ntBASIC4.03□□□□□ -1.76
PCDHGA1Q9Y5H4 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PCDHGA1Q9Y5H4 AC008013.2-202ENST00000637965 364 ntBASIC4.03□□□□□ -1.76
PCDHGA1Q9Y5H4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHGA1Q9Y5H4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PCDHGA1Q9Y5H4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA1Q9Y5H4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA1Q9Y5H4 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHGA1Q9Y5H4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.77
PCDHGA1Q9Y5H4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.03□□□□□ -1.77
PCDHGA1Q9Y5H4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 EXOC5P1-201ENST00000510543 1969 ntBASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 RNA5SP119-201ENST00000362715 117 ntBASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 AL603865.2-201ENST00000401679 213 ntBASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 AL121972.1-201ENST00000402023 252 ntBASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 MIR1179-201ENST00000408703 91 ntBASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 AC069157.1-201ENST00000421749 137 ntBASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 AL354692.1-201ENST00000423044 315 ntBASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 GOT2P5-201ENST00000433995 546 ntBASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 RPL7P22-201ENST00000466005 733 ntBASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 PRDX3P4-201ENST00000470828 747 ntBASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 RNA5SP446-201ENST00000515955 82 ntBASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 MYL12AP1-201ENST00000518490 515 ntBASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 OR4C2P-201ENST00000530855 1064 ntBASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 AP004242.1-201ENST00000533701 349 ntBASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 YWHAZP1-201ENST00000556286 722 ntBASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 OR4G1P-201ENST00000588632 938 ntBASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 AL158050.2-201ENST00000605336 568 ntBASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 Z98200.1-201ENST00000607298 470 ntBASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 AC124312.6-202ENST00000623624 418 ntBASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA1Q9Y5H4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 SNORA60-201ENST00000362396 134 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 RNU6-213P-201ENST00000384051 104 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 RNU6-441P-201ENST00000384545 106 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 RNU6-298P-201ENST00000390888 96 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 MCTS2P-201ENST00000394552 546 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AC005517.2-201ENST00000424673 553 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AC234064.1-201ENST00000436312 247 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AC069285.2-201ENST00000440210 275 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 NOTCH2P1-201ENST00000443481 624 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 FABP3P2-201ENST00000453169 399 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 RPS20P32-201ENST00000456044 356 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 RPL7P1-201ENST00000468161 747 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 RPL7P9-201ENST00000468715 747 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AC104982.1-201ENST00000478775 574 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AC012158.1-204ENST00000483430 465 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AL139099.1-201ENST00000497398 403 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AC078918.1-201ENST00000498515 228 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AC005921.1-201ENST00000510589 286 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 AC010374.2-201ENST00000512933 535 ntBASIC4.01□□□□□ -1.77
PCDHGA1Q9Y5H4 HIGD1AP3-201ENST00000515857 278 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms