Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC243312.2-201ENST00000623340 601 ntBASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 AC099654.6-201ENST00000636487 512 ntBASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
PDZRN3Q9UPQ7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC7.4□□□□□ -1.23
PDZRN3Q9UPQ7 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
PDZRN3Q9UPQ7 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC7.4□□□□□ -1.23
PDZRN3Q9UPQ7 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.4□□□□□ -1.23
PDZRN3Q9UPQ7 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
PDZRN3Q9UPQ7 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 AC011933.2-201ENST00000578539 2790 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 RPL23AP57-201ENST00000332361 466 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 RNU6-1188P-201ENST00000363795 107 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 RNU6-1263P-201ENST00000384601 106 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 FGFR1OP2P1-201ENST00000395943 500 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 AC010385.1-201ENST00000412374 256 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 CHEK2P3-201ENST00000416118 248 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 AC234782.4-201ENST00000417646 1048 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 FABP7P2-201ENST00000429946 379 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 MRPS21P3-201ENST00000436696 262 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 PTMAP6-201ENST00000439110 327 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 AC015983.1-201ENST00000441577 373 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 RPS7P3-201ENST00000443360 580 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 COX6CP18-201ENST00000448769 222 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 FRG2FP-204ENST00000453982 852 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 RPL12P39-201ENST00000455456 496 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 RPL30P15-201ENST00000457129 321 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 RPS23P6-201ENST00000466136 431 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 RNU6-1023P-201ENST00000516137 106 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 MIR2117-201ENST00000516780 80 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 OR4P1P-201ENST00000530808 1136 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 OR10G5P-201ENST00000532733 358 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 AC022080.3-201ENST00000544433 482 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 MIR4420-201ENST00000583944 77 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 AC104695.3-201ENST00000604052 296 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 AC008115.3-201ENST00000614874 549 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 AC015967.1-201ENST00000619893 476 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 MIR6837-201ENST00000620884 64 ntBASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.39□□□□□ -1.23
PDZRN3Q9UPQ7 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 HMGB1P5-201ENST00000255320 642 ntBASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 Y_RNA.80-201ENST00000362996 102 ntBASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 RNU6-1027P-201ENST00000383998 107 ntBASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 RNU6-31P-201ENST00000384388 108 ntBASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 RPS6P12-201ENST00000432491 726 ntBASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 BNIP3P2-201ENST00000441221 577 ntBASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 RN7SL329P-201ENST00000467740 299 ntBASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 AC006390.1-201ENST00000508068 283 ntBASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 HMGB1P42-201ENST00000532126 553 ntBASIC7.38□□□□□ -1.23
PDZRN3Q9UPQ7 AC123904.2-201ENST00000548059 300 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms