Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 AC022031.1-201ENST00000585985 2593 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 SNORD9-201ENST00000362566 104 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 MIR142-201ENST00000384835 87 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 AC004022.2-201ENST00000413824 193 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 TATDN1P1-201ENST00000414123 891 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 PRELID3BP11-201ENST00000414230 479 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 AC127526.1-201ENST00000417526 366 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 ELOCP11-201ENST00000436690 332 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 ELOCP16-201ENST00000444494 332 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 RPL23AP62-201ENST00000463396 453 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 AP000873.1-201ENST00000463987 400 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 AC110768.1-201ENST00000509222 400 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 RN7SKP209-201ENST00000516888 304 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 RNU6-1231P-201ENST00000517185 103 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 DUXAP2-201ENST00000519198 589 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 OR5B10P-201ENST00000532869 642 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 AC025260.1-201ENST00000548858 430 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 AC019176.2-201ENST00000611579 315 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 AL357559.1-201ENST00000622228 274 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 AL391262.2-201ENST00000622466 494 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 AP000553.6-201ENST00000641242 118 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 AL163152.1-201ENST00000642001 374 ntBASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLIP2Q9UDT6 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 AC090337.1-201ENST00000579651 2074 ntBASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 MIR208A-201ENST00000362287 71 ntBASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 RNA5SP44-201ENST00000410446 133 ntBASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 AC006946.1-201ENST00000429106 328 ntBASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 RPS27P5-201ENST00000444247 244 ntBASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 RPS29P31-201ENST00000446147 164 ntBASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 RPL37P3-201ENST00000456825 293 ntBASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 AC108729.2-201ENST00000476543 840 ntBASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 RN7SKP13-201ENST00000515933 244 ntBASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 IGKV2-23-201ENST00000518729 323 ntBASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 AC020914.6-201ENST00000594327 272 ntBASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 AP003117.2-201ENST00000606010 545 ntBASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 U3.45-201ENST00000607547 219 ntBASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 AC083865.1-201ENST00000636634 831 ntBASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
CLIP2Q9UDT6 CEP170P1-201ENST00000502249 4587 ntBASIC4.28□□□□□ -1.73
CLIP2Q9UDT6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 PRO1804-201ENST00000623780 2050 ntBASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 SNORA63.1-201ENST00000362493 131 ntBASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 MIR218-2-201ENST00000385006 110 ntBASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 USP9YP19-201ENST00000412165 485 ntBASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 VTA1P1-201ENST00000414044 866 ntBASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 CRYBB2P1-203ENST00000415709 538 ntBASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 AL357078.2-201ENST00000416486 427 ntBASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 AL353718.1-201ENST00000451028 517 ntBASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 SNORD105B-201ENST00000458770 79 ntBASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 snoU13.22-201ENST00000459428 104 ntBASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 RPL7P49-201ENST00000471402 708 ntBASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 RN7SL293P-201ENST00000481765 281 ntBASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 MTATP6P22-201ENST00000507369 598 ntBASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 CYP2C60P-201ENST00000566088 139 ntBASIC4.27□□□□□ -1.73
CLIP2Q9UDT6 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms