Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC091286.1-201ENST00000431233 461 ntBASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 UBE2V2P1-201ENST00000434717 398 ntBASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 CYCSP43-201ENST00000438233 310 ntBASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 MTND2P8-201ENST00000450555 1025 ntBASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 PLGLA-201ENST00000465668 449 ntBASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 AC093663.1-201ENST00000497190 394 ntBASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 RNU6-1308P-201ENST00000516817 103 ntBASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 RN7SKP234-201ENST00000517173 224 ntBASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 OR5D17P-201ENST00000531492 978 ntBASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 AP000919.1-202ENST00000581139 1264 ntBASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 AC115085.1-201ENST00000588924 229 ntBASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 AL020997.2-201ENST00000602607 184 ntBASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 U3.45-201ENST00000607547 219 ntBASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
VPS29Q9UBQ0 AC091152.2-201ENST00000591628 2569 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 AC138915.3-201ENST00000562908 1389 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 RPL7P26-201ENST00000333817 754 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 Y_RNA.126-201ENST00000363382 111 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 RNA5SP50-201ENST00000363731 107 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 U3.11-201ENST00000364476 212 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 RNU6-805P-201ENST00000365643 106 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 PTMAP2-201ENST00000397627 327 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 RNA5SP44-201ENST00000410446 133 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 AC008065.1-201ENST00000428525 348 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 HMGN2P31-201ENST00000432430 273 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 KCTD10P1-201ENST00000434203 625 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 AC115115.1-201ENST00000449927 248 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 RPL21P13-201ENST00000488305 481 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 PTGES3P3-201ENST00000511479 482 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 ACTR6P1-201ENST00000514311 1104 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 AC034244.2-201ENST00000514668 858 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 AC093331.1-201ENST00000521474 169 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 MIR4276-201ENST00000584832 70 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 AC010615.3-201ENST00000597319 394 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 AC092354.2-201ENST00000607786 514 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 AC112503.1-201ENST00000608436 391 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 AC099778.2-201ENST00000610904 211 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 AL157817.1-201ENST00000614264 790 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 AC007342.8-201ENST00000623278 678 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 AC048347.1-201ENST00000624621 427 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS29Q9UBQ0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 AC092326.2-201ENST00000624772 1561 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 SNORA31-201ENST00000362607 130 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 SNORD56.3-201ENST00000363507 71 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 RNA5SP189-201ENST00000364920 115 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 RNU6-356P-201ENST00000384140 107 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 RNU2-65P-201ENST00000410162 185 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 RPS15AP6-201ENST00000420703 385 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 RPS24P8-201ENST00000431490 402 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 GOT2P5-201ENST00000433995 546 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 VN1R48P-201ENST00000448149 1036 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 RN7SKP289-201ENST00000517244 295 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 SOD1P3-201ENST00000518682 454 ntBASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS29Q9UBQ0 AC092868.3-201ENST00000560515 784 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms