Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 AL139174.1-201ENST00000531489 886 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LRFN1Q9P244 AC091515.1-201ENST00000548110 679 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 AC013444.2-201ENST00000603317 787 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 AC008782.1-201ENST00000603386 430 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 AC121247.2-201ENST00000604776 136 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 AC010738.1-201ENST00000604970 987 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 AC012414.7-202ENST00000622705 1090 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 KPNA2P2-201ENST00000419546 1489 ntBASIC4.49□□□□□ -1.69
LRFN1Q9P244 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.49□□□□□ -1.69
LRFN1Q9P244 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRFN1Q9P244 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRFN1Q9P244 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 RNU6-821P-201ENST00000390995 107 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 MIR298-201ENST00000401212 88 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 AL359643.1-201ENST00000404109 423 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 RPS16P5-201ENST00000406501 404 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 AC009518.2-201ENST00000418056 731 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 AC090960.1-201ENST00000421072 306 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 AL590233.1-201ENST00000430017 456 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 AC073264.2-201ENST00000448886 166 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 NDUFS5P3-201ENST00000450668 321 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 PRPF38AP1-201ENST00000451976 933 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 OR6C5P-201ENST00000452388 923 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 AL122001.1-201ENST00000457027 370 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 AC245028.2-201ENST00000458673 253 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 RN7SL385P-201ENST00000468873 276 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 AC072039.1-201ENST00000477611 581 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 FAM172BP-201ENST00000487497 1089 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 RPL23AP72-201ENST00000492447 435 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRFN1Q9P244 NIFKP7-201ENST00000503365 834 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 MYL12BP2-201ENST00000503948 512 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 AC093809.1-201ENST00000509155 340 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 AC010625.1-201ENST00000511296 403 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 AC100784.1-201ENST00000522790 310 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 AC209154.1-201ENST00000582156 337 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 AC068790.4-201ENST00000602474 263 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 AC112230.1-201ENST00000604342 547 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 IGHV3-29-201ENST00000604817 344 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 AC007497.1-201ENST00000610421 561 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 AC000374.1-201ENST00000434698 1745 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRFN1Q9P244 AL445523.1-201ENST00000451184 1362 ntBASIC4.48□□□□□ -1.69
LRFN1Q9P244 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRFN1Q9P244 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.48□□□□□ -1.69
LRFN1Q9P244 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRFN1Q9P244 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRFN1Q9P244 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRFN1Q9P244 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.47□□□□□ -1.69
LRFN1Q9P244 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LRFN1Q9P244 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.47□□□□□ -1.69
LRFN1Q9P244 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LRFN1Q9P244 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.47□□□□□ -1.69
LRFN1Q9P244 SNORA62-201ENST00000365493 153 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRFN1Q9P244 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.47□□□□□ -1.69
LRFN1Q9P244 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LRFN1Q9P244 RPL21P67-201ENST00000402896 478 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 AL356967.1-201ENST00000406305 431 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRFN1Q9P244 AC119751.6-201ENST00000416712 186 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 MTATP6P27-201ENST00000416987 621 ntBASIC4.47□□□□□ -1.69
LRFN1Q9P244 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.47□□□□□ -1.69
LRFN1Q9P244 AC019178.2-201ENST00000423595 505 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms