Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 VN1R88P-201ENST00000596787 292 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AC092954.1-201ENST00000609121 445 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AC022079.1-201ENST00000621546 602 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AC074140.1-201ENST00000621617 208 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AC067931.1-201ENST00000624190 671 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 ZNF876P-202ENST00000398732 1485 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 AC009229.4-201ENST00000623854 1947 ntBASIC4.03□□□□□ -1.76
SIX2Q9NPC8 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SIX2Q9NPC8 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AC000367.1-201ENST00000452711 1766 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 RNU6-283P-201ENST00000364788 107 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 RNU6-317P-201ENST00000384031 107 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 RNA5SP424-201ENST00000390988 115 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AC114814.2-201ENST00000419195 485 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AL139247.1-201ENST00000422768 325 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AC004975.1-201ENST00000428733 208 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 RPS24P8-201ENST00000431490 402 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AC233982.1-201ENST00000451247 436 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AL121877.1-201ENST00000453704 622 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AL161747.1-201ENST00000480068 358 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AL035404.1-201ENST00000497982 568 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AC010460.1-201ENST00000507087 466 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 HMGB3P13-201ENST00000511263 607 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 RNU6-416P-201ENST00000516265 103 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 MIR2114-201ENST00000516645 80 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 HMGB1P23-201ENST00000518743 568 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AC007991.1-201ENST00000522680 631 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 OR4A2P-201ENST00000527276 913 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 NIFKP8-201ENST00000560500 874 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AC090695.1-201ENST00000561269 1222 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AP001269.3-201ENST00000588718 329 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AP000238.1-201ENST00000608759 426 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AL354798.1-201ENST00000622505 329 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 MIR6810-201ENST00000622701 70 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AC015726.3-201ENST00000624501 418 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AC092608.3-201ENST00000625017 386 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 CU459211.1-201ENST00000635667 749 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AC244205.2-202ENST00000635781 342 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 ZNF663P-202ENST00000641770 1131 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AC006042.3-201ENST00000454684 1469 ntBASIC4.02□□□□□ -1.77
SIX2Q9NPC8 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
SIX2Q9NPC8 AC006504.1-201ENST00000562493 3666 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 AC010300.1-201ENST00000600671 5134 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 MTND4P31-201ENST00000425607 1343 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 AC024560.2-201ENST00000507981 1497 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 RNY3P9-201ENST00000384727 106 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 MIR30B-201ENST00000384850 88 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SIX2Q9NPC8 RPL7P60-201ENST00000397636 735 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 ERHP2-201ENST00000402323 299 ntBASIC4.01□□□□□ -1.77
SIX2Q9NPC8 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms