Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VPS11Q9H270 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS11Q9H270 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS11Q9H270 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS11Q9H270 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS11Q9H270 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS11Q9H270 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS11Q9H270 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS11Q9H270 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS11Q9H270 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS11Q9H270 FRG1BP-201ENST00000278882 761 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 FRG1CP-201ENST00000358464 769 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 RNY4P14-201ENST00000363656 96 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 Y_RNA.160-201ENST00000363677 92 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 RNA5SP90-201ENST00000364801 99 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS11Q9H270 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
VPS11Q9H270 RNU1-77P-201ENST00000390868 162 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 RNU6-780P-201ENST00000391030 104 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 TAF9BP1-201ENST00000396646 746 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 EIF4A1P3-201ENST00000411521 244 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 PIGPP2-201ENST00000411569 458 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 RPS15AP38-201ENST00000413110 372 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS11Q9H270 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS11Q9H270 RPL30P3-201ENST00000424262 333 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 AC012075.1-201ENST00000436549 580 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 RPS29P10-201ENST00000439197 166 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 OR7E125P-201ENST00000443450 846 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 AP000281.1-201ENST00000444036 316 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS11Q9H270 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS11Q9H270 YWHAEP1-201ENST00000453697 763 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 AC100832.1-201ENST00000471945 383 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS11Q9H270 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS11Q9H270 AC027308.1-201ENST00000517993 110 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.14□□□□□ -1.59
VPS11Q9H270 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS11Q9H270 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS11Q9H270 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
VPS11Q9H270 AK6P1-201ENST00000540219 478 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.14□□□□□ -1.59
VPS11Q9H270 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS11Q9H270 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.14□□□□□ -1.59
VPS11Q9H270 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.14□□□□□ -1.59
VPS11Q9H270 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS11Q9H270 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.14□□□□□ -1.59
VPS11Q9H270 AC006960.3-201ENST00000561845 705 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 AL391840.1-201ENST00000571144 367 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.14□□□□□ -1.59
VPS11Q9H270 AC060780.3-201ENST00000589464 80 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS11Q9H270 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS11Q9H270 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS11Q9H270 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 AC010205.1-201ENST00000616668 449 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 AC138649.3-201ENST00000622154 254 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 AP003122.6-201ENST00000623831 495 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 AC124864.2-201ENST00000624736 186 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS11Q9H270 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS11Q9H270 AC074101.1-201ENST00000637861 241 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS11Q9H270 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS11Q9H270 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS11Q9H270 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
VPS11Q9H270 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
VPS11Q9H270 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS11Q9H270 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.14□□□□□ -1.59
VPS11Q9H270 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS11Q9H270 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS11Q9H270 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
VPS11Q9H270 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS11Q9H270 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
VPS11Q9H270 RNU6-1090P-201ENST00000364065 94 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 Y_RNA.356-201ENST00000365475 113 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS11Q9H270 SUGT1P1-201ENST00000379514 476 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 RNU6-1293P-201ENST00000384077 107 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 DSTNP4-201ENST00000399472 474 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 FCF1P10-201ENST00000407590 479 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 TPT1P2-201ENST00000413105 503 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 SDHDP6-201ENST00000414693 480 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS11Q9H270 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS11Q9H270 TMBIM7P-201ENST00000418074 855 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS11Q9H270 RPL7P44-201ENST00000424827 742 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS11Q9H270 YWHAZP8-201ENST00000436935 731 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 MTND6P18-201ENST00000439477 513 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 RPL12P11-201ENST00000439970 501 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS11Q9H270 HMGB3P21-201ENST00000452483 547 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 RFC5P1-201ENST00000454419 874 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms