Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC069061.3-201ENST00000582254 823 ntBASIC6.86□□□□□ -1.31
TRIM47Q96LD4 FKBP1AP1-201ENST00000594588 318 ntBASIC6.86□□□□□ -1.31
TRIM47Q96LD4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.86□□□□□ -1.31
TRIM47Q96LD4 AL133338.2-201ENST00000604292 736 ntBASIC6.86□□□□□ -1.31
TRIM47Q96LD4 AC007546.1-201ENST00000619452 559 ntBASIC6.86□□□□□ -1.31
TRIM47Q96LD4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM47Q96LD4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM47Q96LD4 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM47Q96LD4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
TRIM47Q96LD4 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM47Q96LD4 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.86□□□□□ -1.31
TRIM47Q96LD4 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
TRIM47Q96LD4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.86□□□□□ -1.31
TRIM47Q96LD4 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 PABPC1P6-201ENST00000445594 1829 ntBASIC6.85□□□□□ -1.31
TRIM47Q96LD4 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 AC010615.1-201ENST00000594254 1764 ntBASIC6.85□□□□□ -1.31
TRIM47Q96LD4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 RNU6-216P-201ENST00000363282 104 ntBASIC6.85□□□□□ -1.31
TRIM47Q96LD4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 SNORA70.9-201ENST00000384370 135 ntBASIC6.85□□□□□ -1.31
TRIM47Q96LD4 MIR16-1-201ENST00000385271 89 ntBASIC6.85□□□□□ -1.31
TRIM47Q96LD4 AL390316.1-201ENST00000406279 553 ntBASIC6.85□□□□□ -1.31
TRIM47Q96LD4 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 LSM1P1-201ENST00000438629 273 ntBASIC6.85□□□□□ -1.31
TRIM47Q96LD4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 OR1H1P-201ENST00000448731 937 ntBASIC6.85□□□□□ -1.31
TRIM47Q96LD4 RN7SL72P-201ENST00000460697 269 ntBASIC6.85□□□□□ -1.31
TRIM47Q96LD4 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 AC083795.1-201ENST00000491760 320 ntBASIC6.85□□□□□ -1.31
TRIM47Q96LD4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 RNU6-273P-201ENST00000516937 96 ntBASIC6.85□□□□□ -1.31
TRIM47Q96LD4 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 AL049872.1-201ENST00000556323 322 ntBASIC6.85□□□□□ -1.31
TRIM47Q96LD4 RNU4ATAC-201ENST00000580972 127 ntBASIC6.85□□□□□ -1.31
TRIM47Q96LD4 AF038458.1-201ENST00000588406 262 ntBASIC6.85□□□□□ -1.31
TRIM47Q96LD4 AC078899.3-201ENST00000599065 212 ntBASIC6.85□□□□□ -1.31
TRIM47Q96LD4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 AC018690.1-201ENST00000608144 626 ntBASIC6.85□□□□□ -1.31
TRIM47Q96LD4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
TRIM47Q96LD4 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 PARP4P2-201ENST00000446672 3326 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 RPL32P3-201ENST00000359025 275 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 Y_RNA.270-201ENST00000364693 104 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 RNU1-59P-201ENST00000364829 162 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 Y_RNA.373-201ENST00000365600 103 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 MIR1252-201ENST00000408861 65 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 MRPL53P1-201ENST00000414323 319 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 AL807761.1-201ENST00000417622 171 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 SNORD127-201ENST00000458892 86 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 RPL7P22-201ENST00000466005 733 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.84□□□□□ -1.31
TRIM47Q96LD4 SNORA81.3-201ENST00000517283 198 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 CDH12P4-201ENST00000517835 295 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 CDH12P3-201ENST00000517935 295 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 CDH12P1-201ENST00000518435 295 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 IGLV3-30-201ENST00000524362 298 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 AP003385.6-201ENST00000531603 374 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 AC010201.1-201ENST00000605051 540 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 BCRP9-201ENST00000605312 388 ntBASIC6.84□□□□□ -1.31
TRIM47Q96LD4 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms