Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
USP47Q96K76 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.42□□□□□ -1.7
USP47Q96K76 AC023813.4-201ENST00000607580 580 ntBASIC4.42□□□□□ -1.7
USP47Q96K76 AC007620.3-201ENST00000608131 497 ntBASIC4.42□□□□□ -1.7
USP47Q96K76 AC117490.2-201ENST00000610042 594 ntBASIC4.42□□□□□ -1.7
USP47Q96K76 LINC00901.1-201ENST00000617252 152 ntBASIC4.42□□□□□ -1.7
USP47Q96K76 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.42□□□□□ -1.7
USP47Q96K76 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.42□□□□□ -1.7
USP47Q96K76 AC018692.3-201ENST00000623929 123 ntBASIC4.42□□□□□ -1.7
USP47Q96K76 AP003499.2-201ENST00000624100 483 ntBASIC4.42□□□□□ -1.7
USP47Q96K76 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
USP47Q96K76 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.42□□□□□ -1.7
USP47Q96K76 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
USP47Q96K76 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.41□□□□□ -1.7
USP47Q96K76 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.41□□□□□ -1.7
USP47Q96K76 GTF2IP23-201ENST00000423746 351 ntBASIC4.41□□□□□ -1.7
USP47Q96K76 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP47Q96K76 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.41□□□□□ -1.7
USP47Q96K76 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.41□□□□□ -1.7
USP47Q96K76 RPL31P53-201ENST00000457065 348 ntBASIC4.41□□□□□ -1.7
USP47Q96K76 CYCSP20-201ENST00000473154 315 ntBASIC4.41□□□□□ -1.7
USP47Q96K76 OR5H3P-201ENST00000502817 919 ntBASIC4.41□□□□□ -1.7
USP47Q96K76 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.41□□□□□ -1.7
USP47Q96K76 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.41□□□□□ -1.7
USP47Q96K76 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.41□□□□□ -1.7
USP47Q96K76 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.41□□□□□ -1.7
USP47Q96K76 SYT14P1-202ENST00000600441 1448 ntBASIC4.41□□□□□ -1.7
USP47Q96K76 AC025946.2-201ENST00000603398 234 ntBASIC4.41□□□□□ -1.7
USP47Q96K76 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.41□□□□□ -1.7
USP47Q96K76 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.41□□□□□ -1.7
USP47Q96K76 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.41□□□□□ -1.7
USP47Q96K76 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
USP47Q96K76 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USP47Q96K76 AL365361.1-201ENST00000566942 3481 ntBASIC4.41□□□□□ -1.7
USP47Q96K76 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
USP47Q96K76 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.4□□□□□ -1.7
USP47Q96K76 SNORD56.3-201ENST00000363507 71 ntBASIC4.4□□□□□ -1.7
USP47Q96K76 SNORD67-201ENST00000390833 111 ntBASIC4.4□□□□□ -1.7
USP47Q96K76 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.4□□□□□ -1.7
USP47Q96K76 MTCYBP7-201ENST00000419540 1134 ntBASIC4.4□□□□□ -1.7
USP47Q96K76 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.4□□□□□ -1.7
USP47Q96K76 AL035551.1-201ENST00000446931 348 ntBASIC4.4□□□□□ -1.7
USP47Q96K76 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.4□□□□□ -1.7
USP47Q96K76 AC113192.3-201ENST00000529152 742 ntBASIC4.4□□□□□ -1.7
USP47Q96K76 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.4□□□□□ -1.7
USP47Q96K76 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
USP47Q96K76 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.4□□□□□ -1.7
USP47Q96K76 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.4□□□□□ -1.7
USP47Q96K76 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.4□□□□□ -1.7
USP47Q96K76 AL133370.2-201ENST00000619934 439 ntBASIC4.4□□□□□ -1.7
USP47Q96K76 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.4□□□□□ -1.7
USP47Q96K76 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.4□□□□□ -1.7
USP47Q96K76 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
USP47Q96K76 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
USP47Q96K76 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.4□□□□□ -1.71
USP47Q96K76 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
USP47Q96K76 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.4□□□□□ -1.71
USP47Q96K76 OR52B1P-201ENST00000316506 909 ntBASIC4.4□□□□□ -1.71
USP47Q96K76 MIR422A-201ENST00000362286 90 ntBASIC4.4□□□□□ -1.71
USP47Q96K76 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
USP47Q96K76 AC108734.1-201ENST00000439549 399 ntBASIC4.4□□□□□ -1.71
USP47Q96K76 AC016696.1-201ENST00000446949 318 ntBASIC4.4□□□□□ -1.71
USP47Q96K76 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
USP47Q96K76 AC022431.1-201ENST00000450941 438 ntBASIC4.4□□□□□ -1.71
USP47Q96K76 LARP7P4-201ENST00000481075 878 ntBASIC4.4□□□□□ -1.71
USP47Q96K76 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.4□□□□□ -1.71
USP47Q96K76 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.4□□□□□ -1.71
USP47Q96K76 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.4□□□□□ -1.71
USP47Q96K76 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.4□□□□□ -1.71
USP47Q96K76 AC107918.3-201ENST00000533272 382 ntBASIC4.4□□□□□ -1.71
USP47Q96K76 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.4□□□□□ -1.71
USP47Q96K76 AC084033.1-201ENST00000550830 633 ntBASIC4.4□□□□□ -1.71
USP47Q96K76 CR383656.14-201ENST00000551951 406 ntBASIC4.4□□□□□ -1.71
USP47Q96K76 AP005205.1-201ENST00000563503 508 ntBASIC4.4□□□□□ -1.71
USP47Q96K76 AC018552.3-201ENST00000567416 561 ntBASIC4.4□□□□□ -1.71
USP47Q96K76 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.4□□□□□ -1.71
USP47Q96K76 AC010680.3-201ENST00000604215 520 ntBASIC4.4□□□□□ -1.71
USP47Q96K76 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.4□□□□□ -1.71
USP47Q96K76 AC119674.1-212ENST00000641155 993 ntBASIC4.4□□□□□ -1.71
USP47Q96K76 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP47Q96K76 AC118273.1-201ENST00000525324 3006 ntBASIC4.39□□□□□ -1.71
USP47Q96K76 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
USP47Q96K76 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP47Q96K76 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP47Q96K76 RNU6-386P-201ENST00000362650 107 ntBASIC4.39□□□□□ -1.71
USP47Q96K76 RPL5P18-201ENST00000406671 891 ntBASIC4.39□□□□□ -1.71
USP47Q96K76 VN1R51P-201ENST00000411675 945 ntBASIC4.39□□□□□ -1.71
USP47Q96K76 RPL23AP4-201ENST00000427757 463 ntBASIC4.39□□□□□ -1.71
USP47Q96K76 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.39□□□□□ -1.71
USP47Q96K76 CCRL1P1-201ENST00000449542 1053 ntBASIC4.39□□□□□ -1.71
USP47Q96K76 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.39□□□□□ -1.71
USP47Q96K76 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.39□□□□□ -1.71
USP47Q96K76 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.39□□□□□ -1.71
USP47Q96K76 RNU6-1231P-201ENST00000517185 103 ntBASIC4.39□□□□□ -1.71
USP47Q96K76 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.39□□□□□ -1.71
USP47Q96K76 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.39□□□□□ -1.71
USP47Q96K76 AC006539.2-201ENST00000601729 572 ntBASIC4.39□□□□□ -1.71
USP47Q96K76 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.39□□□□□ -1.71
USP47Q96K76 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.39□□□□□ -1.71
USP47Q96K76 AC019131.2-201ENST00000609071 870 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms