Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 AC099654.5-201ENST00000636479 350 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
DDX11Q96FC9 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
DDX11Q96FC9 SOCS5P3-201ENST00000425115 1576 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
DDX11Q96FC9 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
DDX11Q96FC9 AC015813.6-201ENST00000624409 5808 ntBASIC5.71□□□□□ -1.5
DDX11Q96FC9 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.7□□□□□ -1.5
DDX11Q96FC9 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DDX11Q96FC9 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DDX11Q96FC9 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DDX11Q96FC9 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DDX11Q96FC9 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DDX11Q96FC9 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
DDX11Q96FC9 RNA5SP505-201ENST00000364748 108 ntBASIC5.7□□□□□ -1.5
DDX11Q96FC9 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DDX11Q96FC9 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.7□□□□□ -1.5
DDX11Q96FC9 Y_RNA.582-201ENST00000391023 95 ntBASIC5.7□□□□□ -1.5
DDX11Q96FC9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.7□□□□□ -1.5
DDX11Q96FC9 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.7□□□□□ -1.5
DDX11Q96FC9 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.7□□□□□ -1.5
DDX11Q96FC9 GLRXP1-201ENST00000423261 334 ntBASIC5.7□□□□□ -1.5
DDX11Q96FC9 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.7□□□□□ -1.5
DDX11Q96FC9 AC092162.1-201ENST00000432828 434 ntBASIC5.7□□□□□ -1.5
DDX11Q96FC9 HMGB1P31-201ENST00000437242 427 ntBASIC5.7□□□□□ -1.5
DDX11Q96FC9 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.7□□□□□ -1.5
DDX11Q96FC9 SLC25A18P1-201ENST00000449385 454 ntBASIC5.7□□□□□ -1.5
DDX11Q96FC9 AC243772.1-201ENST00000451620 410 ntBASIC5.7□□□□□ -1.5
DDX11Q96FC9 AL513533.1-201ENST00000453728 415 ntBASIC5.7□□□□□ -1.5
DDX11Q96FC9 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.7□□□□□ -1.5
DDX11Q96FC9 PNPLA4P1-201ENST00000458328 305 ntBASIC5.7□□□□□ -1.5
DDX11Q96FC9 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.7□□□□□ -1.5
DDX11Q96FC9 VPS26AP1-201ENST00000483197 979 ntBASIC5.7□□□□□ -1.5
DDX11Q96FC9 FAM92A1P2-202ENST00000504766 877 ntBASIC5.7□□□□□ -1.5
DDX11Q96FC9 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.7□□□□□ -1.5
DDX11Q96FC9 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DDX11Q96FC9 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.7□□□□□ -1.5
DDX11Q96FC9 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.7□□□□□ -1.5
DDX11Q96FC9 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.7□□□□□ -1.5
DDX11Q96FC9 AL049839.1-201ENST00000556151 657 ntBASIC5.7□□□□□ -1.5
DDX11Q96FC9 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.7□□□□□ -1.5
DDX11Q96FC9 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.7□□□□□ -1.5
DDX11Q96FC9 AC087477.6-201ENST00000559595 843 ntBASIC5.7□□□□□ -1.5
DDX11Q96FC9 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.7□□□□□ -1.5
DDX11Q96FC9 TVP23CP2-201ENST00000571473 623 ntBASIC5.7□□□□□ -1.5
DDX11Q96FC9 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.7□□□□□ -1.5
DDX11Q96FC9 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.7□□□□□ -1.5
DDX11Q96FC9 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.7□□□□□ -1.5
DDX11Q96FC9 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC5.7□□□□□ -1.5
DDX11Q96FC9 AC091304.9-201ENST00000612091 226 ntBASIC5.7□□□□□ -1.5
DDX11Q96FC9 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DDX11Q96FC9 AC012150.2-201ENST00000621300 544 ntBASIC5.7□□□□□ -1.5
DDX11Q96FC9 AC015871.5-202ENST00000623252 701 ntBASIC5.7□□□□□ -1.5
DDX11Q96FC9 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DDX11Q96FC9 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
DDX11Q96FC9 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
DDX11Q96FC9 MAPK10-320ENST00000641462 6696 ntBASIC5.69□□□□□ -1.5
DDX11Q96FC9 CR383658.2-201ENST00000547576 1525 ntBASIC5.69□□□□□ -1.5
DDX11Q96FC9 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
DDX11Q96FC9 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DDX11Q96FC9 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
DDX11Q96FC9 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.69□□□□□ -1.5
DDX11Q96FC9 HMGB1P5-201ENST00000255320 642 ntBASIC5.69□□□□□ -1.5
DDX11Q96FC9 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
DDX11Q96FC9 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DDX11Q96FC9 SNORA72.1-201ENST00000363485 129 ntBASIC5.69□□□□□ -1.5
DDX11Q96FC9 Y_RNA.256-201ENST00000364594 104 ntBASIC5.69□□□□□ -1.5
DDX11Q96FC9 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DDX11Q96FC9 AL161909.1-201ENST00000397390 712 ntBASIC5.69□□□□□ -1.5
DDX11Q96FC9 FGF7P8-201ENST00000402994 292 ntBASIC5.69□□□□□ -1.5
DDX11Q96FC9 RAB28P1-201ENST00000411517 641 ntBASIC5.69□□□□□ -1.5
DDX11Q96FC9 MTATP6P27-201ENST00000416987 621 ntBASIC5.69□□□□□ -1.5
DDX11Q96FC9 GAPDHP49-201ENST00000421421 961 ntBASIC5.69□□□□□ -1.5
DDX11Q96FC9 Z93242.1-201ENST00000427102 353 ntBASIC5.69□□□□□ -1.5
DDX11Q96FC9 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.69□□□□□ -1.5
DDX11Q96FC9 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.69□□□□□ -1.5
DDX11Q96FC9 DNAJC19P7-201ENST00000428811 344 ntBASIC5.69□□□□□ -1.5
DDX11Q96FC9 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.69□□□□□ -1.5
DDX11Q96FC9 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
DDX11Q96FC9 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.69□□□□□ -1.5
DDX11Q96FC9 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.69□□□□□ -1.5
DDX11Q96FC9 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.69□□□□□ -1.5
DDX11Q96FC9 TPT1P14-201ENST00000448018 505 ntBASIC5.69□□□□□ -1.5
DDX11Q96FC9 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.69□□□□□ -1.5
DDX11Q96FC9 RN7SL354P-201ENST00000469282 294 ntBASIC5.69□□□□□ -1.5
DDX11Q96FC9 MTND6P6-201ENST00000478031 263 ntBASIC5.69□□□□□ -1.5
DDX11Q96FC9 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DDX11Q96FC9 AC098799.2-201ENST00000509466 868 ntBASIC5.69□□□□□ -1.5
DDX11Q96FC9 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.69□□□□□ -1.5
DDX11Q96FC9 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.69□□□□□ -1.5
DDX11Q96FC9 RNY4P37-201ENST00000516225 96 ntBASIC5.69□□□□□ -1.5
DDX11Q96FC9 IGKV1-32-201ENST00000519290 311 ntBASIC5.69□□□□□ -1.5
DDX11Q96FC9 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DDX11Q96FC9 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.69□□□□□ -1.5
DDX11Q96FC9 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.69□□□□□ -1.5
DDX11Q96FC9 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.69□□□□□ -1.5
DDX11Q96FC9 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.69□□□□□ -1.5
DDX11Q96FC9 GTF2IP8-201ENST00000560687 584 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms