Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 AL136126.1-201ENST00000473603 402 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 RN7SL326P-201ENST00000477493 296 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 RPL23AP55-201ENST00000498163 452 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 SNORA40.14-201ENST00000516543 86 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 RNU6-64P-201ENST00000517119 105 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC6.66□□□□□ -1.34
HLA-CQ95604 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.66□□□□□ -1.34
HLA-CQ95604 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
HLA-CQ95604 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.66□□□□□ -1.34
HLA-CQ95604 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.66□□□□□ -1.34
HLA-CQ95604 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.66□□□□□ -1.34
HLA-CQ95604 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.66□□□□□ -1.34
HLA-CQ95604 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 AL590099.1-201ENST00000615276 138 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 AL161637.1-201ENST00000622380 412 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC6.66□□□□□ -1.34
HLA-CQ95604 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-CQ95604 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-CQ95604 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-CQ95604 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-CQ95604 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-CQ95604 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-CQ95604 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
HLA-CQ95604 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-CQ95604 AC110716.2-201ENST00000563865 3945 ntBASIC6.66□□□□□ -1.34
HLA-CQ95604 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-CQ95604 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HLA-CQ95604 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
HLA-CQ95604 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HLA-CQ95604 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HLA-CQ95604 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC6.65□□□□□ -1.34
HLA-CQ95604 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.65□□□□□ -1.34
HLA-CQ95604 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
HLA-CQ95604 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC6.65□□□□□ -1.34
HLA-CQ95604 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HLA-CQ95604 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.65□□□□□ -1.34
HLA-CQ95604 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
HLA-CQ95604 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HLA-CQ95604 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HLA-CQ95604 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
HLA-CQ95604 U3.7-201ENST00000363668 216 ntBASIC6.65□□□□□ -1.34
HLA-CQ95604 RNA5SP132-201ENST00000364725 118 ntBASIC6.65□□□□□ -1.34
HLA-CQ95604 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HLA-CQ95604 OR6E1P-201ENST00000414424 923 ntBASIC6.65□□□□□ -1.34
HLA-CQ95604 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC6.65□□□□□ -1.34
HLA-CQ95604 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.65□□□□□ -1.34
HLA-CQ95604 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.65□□□□□ -1.34
HLA-CQ95604 FAR2P4-202ENST00000425399 584 ntBASIC6.65□□□□□ -1.34
HLA-CQ95604 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.65□□□□□ -1.34
HLA-CQ95604 NOTCH2P1-201ENST00000443481 624 ntBASIC6.65□□□□□ -1.34
HLA-CQ95604 RPL39P38-201ENST00000467018 153 ntBASIC6.65□□□□□ -1.34
HLA-CQ95604 OARD1-209ENST00000471367 401 ntTSL 2 BASIC6.65□□□□□ -1.34
HLA-CQ95604 MED28P2-201ENST00000475771 317 ntBASIC6.65□□□□□ -1.34
HLA-CQ95604 RN7SL714P-201ENST00000487050 298 ntBASIC6.65□□□□□ -1.34
HLA-CQ95604 GZMAP1-201ENST00000503054 631 ntBASIC6.65□□□□□ -1.34
HLA-CQ95604 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC6.65□□□□□ -1.34
HLA-CQ95604 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.65□□□□□ -1.34
HLA-CQ95604 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HLA-CQ95604 CYCSP27-201ENST00000527643 293 ntBASIC6.65□□□□□ -1.34
HLA-CQ95604 EIF4A2P5-201ENST00000529914 499 ntBASIC6.65□□□□□ -1.34
HLA-CQ95604 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.65□□□□□ -1.34
HLA-CQ95604 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.65□□□□□ -1.34
HLA-CQ95604 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.65□□□□□ -1.34
HLA-CQ95604 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC6.65□□□□□ -1.34
HLA-CQ95604 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.65□□□□□ -1.34
HLA-CQ95604 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.65□□□□□ -1.34
HLA-CQ95604 HMGN2P28-201ENST00000606102 262 ntBASIC6.65□□□□□ -1.34
HLA-CQ95604 AC091768.1-201ENST00000609258 930 ntBASIC6.65□□□□□ -1.34
HLA-CQ95604 AC103858.2-201ENST00000621471 543 ntBASIC6.65□□□□□ -1.34
HLA-CQ95604 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.65□□□□□ -1.34
HLA-CQ95604 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HLA-CQ95604 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
HLA-CQ95604 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC6.65□□□□□ -1.35
HLA-CQ95604 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HLA-CQ95604 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
HLA-CQ95604 SAGE4P-201ENST00000442271 3381 ntBASIC6.65□□□□□ -1.35
HLA-CQ95604 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
HLA-CQ95604 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
HLA-CQ95604 GABPAP-201ENST00000419271 1356 ntBASIC6.65□□□□□ -1.35
HLA-CQ95604 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HLA-CQ95604 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HLA-CQ95604 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
HLA-CQ95604 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HLA-CQ95604 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HLA-CQ95604 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
HLA-CQ95604 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
HLA-CQ95604 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
HLA-CQ95604 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HLA-CQ95604 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.64□□□□□ -1.35
HLA-CQ95604 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HLA-CQ95604 Z95327.2-201ENST00000414579 1873 ntBASIC6.64□□□□□ -1.35
HLA-CQ95604 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
HLA-CQ95604 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
HLA-CQ95604 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
HLA-CQ95604 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HLA-CQ95604 AC092079.1-201ENST00000558620 1985 ntBASIC6.64□□□□□ -1.35
HLA-CQ95604 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.64□□□□□ -1.35
HLA-CQ95604 AC092821.2-201ENST00000545710 2042 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms