Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 AC006518.1-201ENST00000541449 943 ntBASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 AL157394.1-201ENST00000562983 1224 ntBASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 Z83843.1-201ENST00000604070 3685 ntBASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 AC007342.7-201ENST00000624610 2337 ntBASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 FTLP6-201ENST00000355274 422 ntBASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 HMGB1P21-201ENST00000502313 581 ntBASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 RFPL1S-203ENST00000539579 330 ntBASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 MIR4524B-201ENST00000581569 115 ntBASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 AC006557.5-201ENST00000603126 811 ntBASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 AP005212.4-201ENST00000614206 710 ntBASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.27□□□□□ -1.89
SHROOM3Q8TF72 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 MIR148B-201ENST00000362252 99 ntBASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 SNORA7.4-201ENST00000384249 137 ntBASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 AL583834.1-201ENST00000406943 343 ntBASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 EEF1A1P41-201ENST00000414667 207 ntBASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 AL353705.1-201ENST00000433468 480 ntBASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 AC245517.2-201ENST00000442890 346 ntBASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 RPS4XP22-201ENST00000480755 780 ntBASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 AC068724.1-201ENST00000487100 792 ntBASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 AC108078.3-201ENST00000502633 489 ntBASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 AC113398.2-201ENST00000507630 558 ntBASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 AC015917.1-201ENST00000579654 510 ntBASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 RPL23AP92-201ENST00000603609 255 ntBASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 AC007342.9-201ENST00000623877 1385 ntBASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SHROOM3Q8TF72 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 AC073325.2-201ENST00000339545 159 ntBASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 LIPT1P1-201ENST00000415870 1186 ntBASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 RN7SL442P-201ENST00000473804 320 ntBASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 VN1R104P-201ENST00000505115 1009 ntBASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 AC015871.2-201ENST00000603605 948 ntBASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 AC022960.2-201ENST00000616300 666 ntBASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 AC005002.1-201ENST00000447458 540 ntBASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 AC104027.1-201ENST00000521887 300 ntBASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 NF1P10-201ENST00000613227 742 ntBASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 MIR7153-201ENST00000637758 57 ntBASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SHROOM3Q8TF72 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 MIR422A-201ENST00000362286 90 ntBASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 SKINT1L-201ENST00000401057 817 ntBASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 RNA5SP184-201ENST00000411071 108 ntBASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 SETP10-201ENST00000424368 814 ntBASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 UBE2V2P3-201ENST00000433562 437 ntBASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 HMGB3P11-201ENST00000440127 604 ntBASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 AP001992.1-205ENST00000462248 379 ntBASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 YWHAEP4-201ENST00000505390 198 ntBASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 SNORA70.19-201ENST00000516717 90 ntBASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 AF186190.1-201ENST00000517470 480 ntBASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 AC113192.3-201ENST00000529152 742 ntBASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.24□□□□□ -1.89
SHROOM3Q8TF72 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms