Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMC1BQ8NDV3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 AC016716.1-201ENST00000265882 708 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 RNU6-216P-201ENST00000363282 104 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 RNA5SP513-201ENST00000364648 118 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 Y_RNA.302-201ENST00000364997 102 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 MIR506-201ENST00000384998 124 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 MTCO3P31-201ENST00000405526 789 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 TMSB10P2-201ENST00000416049 131 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 AC092013.1-201ENST00000438795 332 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 MTND2P20-201ENST00000440805 661 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 AP000936.2-201ENST00000447151 681 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 NPM1P39-201ENST00000449818 867 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 VN1R32P-201ENST00000452234 905 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 OR6C5P-201ENST00000452388 923 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 KATNBL1P6-201ENST00000453433 915 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 ZNF114P1-201ENST00000453500 292 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 RNU6-956P-201ENST00000458868 103 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 AC006511.1-201ENST00000470614 315 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 AC090071.1-201ENST00000507713 644 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 SNORA74D-201ENST00000516404 141 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 AC239860.2-201ENST00000525886 270 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 OR5BC1P-201ENST00000529327 739 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 MIR3936-201ENST00000584304 110 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 AC008687.2-201ENST00000597865 520 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 AC083899.3-201ENST00000603413 594 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 AC012468.1-201ENST00000604888 430 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 AC128687.1-201ENST00000605304 619 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 AC009878.1-201ENST00000621819 340 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 AC039056.2-201ENST00000622261 511 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 AC084035.1-201ENST00000634543 607 ntBASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SMC1BQ8NDV3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
SMC1BQ8NDV3 AC108467.2-201ENST00000617640 1597 ntBASIC5.59□□□□□ -1.52
SMC1BQ8NDV3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.59□□□□□ -1.52
SMC1BQ8NDV3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
SMC1BQ8NDV3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 ZNF37BP-203ENST00000452306 1352 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 MTND5P24-201ENST00000438892 1767 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 U3.4-201ENST00000363352 213 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 RNU6-444P-201ENST00000383988 108 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 MIR634-201ENST00000385208 97 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 RNU6-192P-201ENST00000391253 100 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 PRRC2CP1-201ENST00000404428 159 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 RN7SKP177-201ENST00000410567 355 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 CTSL3P-202ENST00000412179 788 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 PRELID3BP11-201ENST00000414230 479 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC069157.1-201ENST00000421749 137 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AL049610.1-201ENST00000423374 372 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC093698.1-201ENST00000423843 571 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC018644.1-201ENST00000429934 551 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC010881.1-201ENST00000433830 235 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 TMX2P1-201ENST00000436507 708 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC013828.1-201ENST00000481845 158 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC108078.3-201ENST00000502633 489 ntBASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.58□□□□□ -1.52
SMC1BQ8NDV3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms