Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
C9orf40Q8IXQ3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 RNA5SP391-201ENST00000363456 119 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 RNU6-353P-201ENST00000364266 108 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 RNU6ATAC-201ENST00000408749 126 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AL035246.1-201ENST00000433554 1255 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC023347.2-201ENST00000433994 462 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC007389.2-201ENST00000434630 306 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC004865.1-201ENST00000442276 1003 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AL592437.1-201ENST00000443781 492 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 HMGB1P48-201ENST00000446155 598 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC233982.1-201ENST00000451247 436 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 NIPA2P2-201ENST00000496376 1083 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 UBE2CP3-201ENST00000502715 450 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC026414.1-201ENST00000504046 698 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 SUMO2P5-201ENST00000506790 245 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 MTATP6P22-201ENST00000507369 598 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC020593.1-201ENST00000507399 299 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 USP9YP5-201ENST00000511770 630 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC010374.2-201ENST00000512933 535 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 RNU6-416P-201ENST00000516265 103 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 SUMO2P20-201ENST00000520803 283 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 MED28P5-201ENST00000528254 438 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC091488.1-201ENST00000604239 660 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AL049634.3-201ENST00000604968 457 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AL158050.2-201ENST00000605336 568 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 RNU1-30P-201ENST00000606575 163 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 uc_338.32-201ENST00000615087 172 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC009269.6-201ENST00000621778 588 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC039056.2-201ENST00000622261 511 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AL391262.2-201ENST00000622466 494 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC067852.7-201ENST00000623270 535 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AL109659.3-201ENST00000624985 950 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC004808.1-201ENST00000627671 721 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 BX649567.1-201ENST00000642071 1134 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 AC095050.2-201ENST00000510748 1458 ntBASIC3.47□□□□□ -1.85
C9orf40Q8IXQ3 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
C9orf40Q8IXQ3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
C9orf40Q8IXQ3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 RNU6-549P-201ENST00000384433 107 ntBASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 RNA5SP424-201ENST00000390988 115 ntBASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 AC007066.1-201ENST00000392902 381 ntBASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 RPL7P60-201ENST00000397636 735 ntBASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 RPL7P27-201ENST00000403775 720 ntBASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 PRRC2CP1-201ENST00000404428 159 ntBASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 MIR1183-201ENST00000408856 89 ntBASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 AC004022.2-201ENST00000413824 193 ntBASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 AL009174.1-201ENST00000426577 416 ntBASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 HIGD1AP12-201ENST00000427832 281 ntBASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 AC105402.2-201ENST00000438503 358 ntBASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 NDUFS5P3-201ENST00000450668 321 ntBASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 ACTR3P3-201ENST00000480448 893 ntBASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 SAP18P1-201ENST00000512058 390 ntBASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 AC119751.1-201ENST00000513357 765 ntBASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 AC010342.1-201ENST00000514047 877 ntBASIC3.46□□□□□ -1.86
C9orf40Q8IXQ3 IGKV2D-23-201ENST00000518179 286 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms