Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.77□□□□□ -1.33
SCUBE3Q8IX30 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 RNA5SP258-201ENST00000362750 119 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 RNA5SP485-201ENST00000365053 119 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 RNU6-61P-201ENST00000365528 109 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 RNU6-338P-201ENST00000383888 105 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 HMGN1P24-201ENST00000412282 298 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AC011933.1-201ENST00000413334 321 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 BX682237.1-201ENST00000415016 335 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AC114491.1-201ENST00000416095 246 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 RPS15AP27-201ENST00000449183 343 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AC092647.2-201ENST00000452998 253 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 TRBV26-201ENST00000456572 344 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AC068522.1-201ENST00000482895 345 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 IL7R-208ENST00000511982 612 ntTSL 2 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 SNORA25.11-201ENST00000515935 105 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 RNA5SP418-201ENST00000515951 117 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 SUB1P3-201ENST00000564581 315 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AC012433.1-201ENST00000588916 398 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AC067852.5-201ENST00000589299 310 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AC006557.5-201ENST00000603126 811 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 RPL23AP92-201ENST00000603609 255 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 HMGB1P50-201ENST00000605814 607 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AP001052.1-201ENST00000626421 99 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 CYP3A51P-201ENST00000633513 256 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 ANKRD36BP1-201ENST00000358576 1779 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 AC105749.1-201ENST00000631338 2008 ntBASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.76□□□□□ -1.33
SCUBE3Q8IX30 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 AL359976.1-201ENST00000418655 3528 ntBASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 AC104966.1-201ENST00000467010 1464 ntBASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 Y_RNA.26-201ENST00000362539 101 ntBASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 RNA5SP333-201ENST00000363466 118 ntBASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 RNA5SP334-201ENST00000364825 118 ntBASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 Y_RNA.314-201ENST00000365114 102 ntBASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 SNORA24.1-201ENST00000384401 135 ntBASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 AC110754.1-201ENST00000399740 601 ntBASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 PRRC2CP1-201ENST00000404428 159 ntBASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 USP9YP30-201ENST00000430729 455 ntBASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 RPL37P1-201ENST00000432310 284 ntBASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 COX4I1P2-201ENST00000447446 547 ntBASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 RN7SL39P-201ENST00000462264 297 ntBASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 RPS27P20-201ENST00000492051 246 ntBASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 AL049779.2-201ENST00000553847 315 ntBASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.75□□□□□ -1.33
SCUBE3Q8IX30 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms