Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC018445.2-201ENST00000622987 260 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC139792.3-201ENST00000623525 224 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AL359697.1-201ENST00000624879 587 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 MIR3662-201ENST00000637030 95 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC131971.1-201ENST00000332881 1482 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 SNORA17.1-201ENST00000362945 126 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 RNU6-282P-201ENST00000365357 103 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 RNU6-441P-201ENST00000384545 106 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 MIR92A2-201ENST00000385299 75 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AC016769.3-201ENST00000396562 315 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AL133482.1-201ENST00000415988 498 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 RPL21P111-201ENST00000418453 477 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AC002381.1-201ENST00000447049 280 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AP000542.1-201ENST00000448473 371 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 ARPC3P5-201ENST00000448802 534 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 HIGD1AP8-201ENST00000453927 274 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AL035090.1-201ENST00000454835 332 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 RNU6-1218P-201ENST00000458990 108 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 RN7SL515P-201ENST00000463999 297 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AC023598.1-201ENST00000472521 361 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 RPSAP50-201ENST00000481955 852 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 HMGN1P12-201ENST00000499125 195 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 MTCYBP18-201ENST00000501056 747 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 MTCO1P35-201ENST00000515270 228 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 Y_RNA.693-201ENST00000516641 110 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 RNA5SP230-201ENST00000517039 122 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AC024940.3-201ENST00000538551 316 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 HMGN2P6-201ENST00000551091 273 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 NRBF2P1-201ENST00000587407 859 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 RPL12P25-202ENST00000598100 674 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 BBIP1P1-201ENST00000602999 279 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AC244107.2-201ENST00000611773 76 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 MIR6133-201ENST00000617057 108 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 HSPA8P14-201ENST00000552265 1805 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AC107081.3-201ENST00000612715 2034 ntBASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM48Q8IWZ4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 U3.2-201ENST00000362981 210 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 MIR600-201ENST00000385007 98 ntBASIC5.16□□□□□ -1.58
TRIM48Q8IWZ4 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms