Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 OR52E6-202ENST00000379946 954 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 RNU6-356P-201ENST00000384140 107 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 RNU2-21P-201ENST00000410368 188 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 RPS15AP6-201ENST00000420703 385 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 VN1R42P-201ENST00000424651 344 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 MTND4P15-201ENST00000437913 1033 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 MTCYBP31-201ENST00000438855 1122 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 H2AFZP6-201ENST00000444403 394 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 TPT1P12-201ENST00000448968 492 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 AP000563.1-201ENST00000490865 758 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 CEACAMP10-202ENST00000495431 496 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 AC005351.1-201ENST00000511152 786 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 AC023141.12-201ENST00000512399 199 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 RN7SKP122-201ENST00000515923 296 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 SOD1P3-201ENST00000518682 454 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 CYCSP30-201ENST00000546447 172 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 AC010928.3-201ENST00000587712 541 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 AC006254.3-201ENST00000603353 884 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 AL671309.1-201ENST00000603750 544 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 AL591034.3-201ENST00000605511 685 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 AL021368.1-201ENST00000607490 540 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 FRG1HP-204ENST00000617940 757 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 AL163051.2-201ENST00000618976 735 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 FP236240.3-201ENST00000623061 327 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 AC110801.1-201ENST00000623590 212 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
NUDCD3Q8IVD9 AL157700.1-201ENST00000561973 1432 ntBASIC3.53□□□□□ -1.85
NUDCD3Q8IVD9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 AL121657.1-201ENST00000327215 531 ntBASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 RNU1-75P-201ENST00000347264 129 ntBASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 RNU6-650P-201ENST00000365658 111 ntBASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 SNORA70C-201ENST00000384538 135 ntBASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 AC092745.2-202ENST00000411880 369 ntBASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 AIMP1P1-201ENST00000418670 937 ntBASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 AC245054.1-201ENST00000420944 258 ntBASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 AL591419.1-201ENST00000427423 339 ntBASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 ETF1P3-201ENST00000430422 1160 ntBASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 AC239367.2-201ENST00000447309 705 ntBASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 AL353718.1-201ENST00000451028 517 ntBASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 RPS4XP2-201ENST00000458402 793 ntBASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 RN7SL442P-201ENST00000473804 320 ntBASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 AC126121.1-201ENST00000482313 553 ntBASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 FABP5P12-201ENST00000515543 389 ntBASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 SNORA70.19-201ENST00000516717 90 ntBASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 AC099778.2-201ENST00000610904 211 ntBASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NUDCD3Q8IVD9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AC126755.2-208ENST00000327792 462 ntBASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 AC138969.1-213ENST00000331436 462 ntBASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 RNU6-792P-201ENST00000363490 107 ntBASIC3.51□□□□□ -1.85
NUDCD3Q8IVD9 PRRC2CP1-201ENST00000404428 159 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms