Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NPAS4Q8IUM7 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 EIF2AP4-201ENST00000424793 1781 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 AC105074.1-201ENST00000623380 3095 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 SNORD1C-201ENST00000363315 78 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 RNU6-534P-201ENST00000364877 106 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 RNA5SP339-201ENST00000390987 122 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 FAT1P1-201ENST00000406588 507 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 RNU2-62P-201ENST00000410868 191 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 AL138785.1-201ENST00000425821 331 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 EZH2P1-201ENST00000431167 291 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 RPL12P3-201ENST00000440080 396 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 CALM1P1-201ENST00000442082 433 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 AL589765.3-201ENST00000446084 462 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 AC105399.1-202ENST00000447303 205 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 AC108059.3-201ENST00000456388 214 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 MTCO3P9-201ENST00000506989 781 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 TOMM22P4-201ENST00000511318 336 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 RNU6-1281P-201ENST00000516223 105 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 AC078899.1-201ENST00000521432 1185 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 RN7SL708P-201ENST00000580952 299 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 AC022432.1-201ENST00000595739 310 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 AC005261.5-201ENST00000596280 355 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 KC877982.1-201ENST00000602313 470 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 AL162413.1-201ENST00000603198 110 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 AL391646.1-201ENST00000603860 190 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 AL590099.1-201ENST00000615276 138 ntBASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
NPAS4Q8IUM7 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 SNORA63-201ENST00000363450 132 ntBASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 RNU6-1097P-201ENST00000363586 107 ntBASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 RNA5SP514-201ENST00000363717 111 ntBASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 RNU6-282P-201ENST00000365357 103 ntBASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 RNU6-339P-201ENST00000384310 107 ntBASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 SNORD51-201ENST00000384320 80 ntBASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 HMGN1P24-201ENST00000412282 298 ntBASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 CYCSP10-201ENST00000417973 294 ntBASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 MTATP6P18-201ENST00000417994 673 ntBASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 ZNF90P2-204ENST00000419323 1075 ntBASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 AC108075.1-201ENST00000424692 529 ntBASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 AC055855.1-201ENST00000489563 579 ntBASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 Y_RNA.675-201ENST00000516389 149 ntBASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 Y_RNA.704-201ENST00000516851 102 ntBASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 AC068446.3-201ENST00000555285 382 ntBASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 AC060780.3-201ENST00000589464 80 ntBASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 AP000942.4-201ENST00000604811 241 ntBASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 AL451044.1-201ENST00000604867 238 ntBASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 AL121655.1-201ENST00000605811 308 ntBASIC6.02□□□□□ -1.45
NPAS4Q8IUM7 AC093388.1-201ENST00000609166 430 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms