Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.05□□□□□ -1.76
SHFQ7M4L6 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.05□□□□□ -1.76
SHFQ7M4L6 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.05□□□□□ -1.76
SHFQ7M4L6 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHFQ7M4L6 NDUFA5P2-201ENST00000519723 344 ntBASIC4.05□□□□□ -1.76
SHFQ7M4L6 DEFB131D-201ENST00000526803 184 ntBASIC4.05□□□□□ -1.76
SHFQ7M4L6 OR4A12P-201ENST00000530847 918 ntBASIC4.05□□□□□ -1.76
SHFQ7M4L6 AP001880.2-201ENST00000538233 448 ntBASIC4.05□□□□□ -1.76
SHFQ7M4L6 PDCD5P1-201ENST00000543528 309 ntBASIC4.05□□□□□ -1.76
SHFQ7M4L6 AL121766.1-201ENST00000547436 487 ntBASIC4.05□□□□□ -1.76
SHFQ7M4L6 AL110118.1-201ENST00000553543 400 ntBASIC4.05□□□□□ -1.76
SHFQ7M4L6 CYCSP2-201ENST00000558168 301 ntBASIC4.05□□□□□ -1.76
SHFQ7M4L6 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.05□□□□□ -1.76
SHFQ7M4L6 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.05□□□□□ -1.76
SHFQ7M4L6 ACTR3BP3-201ENST00000565577 979 ntBASIC4.05□□□□□ -1.76
SHFQ7M4L6 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.05□□□□□ -1.76
SHFQ7M4L6 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.05□□□□□ -1.76
SHFQ7M4L6 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.05□□□□□ -1.76
SHFQ7M4L6 AC146944.4-201ENST00000602697 718 ntBASIC4.05□□□□□ -1.76
SHFQ7M4L6 AC073114.1-201ENST00000612027 490 ntBASIC4.05□□□□□ -1.76
SHFQ7M4L6 AC011939.3-201ENST00000613686 466 ntBASIC4.05□□□□□ -1.76
SHFQ7M4L6 MIR6864-201ENST00000617935 70 ntBASIC4.05□□□□□ -1.76
SHFQ7M4L6 AC009704.2-201ENST00000618739 483 ntBASIC4.05□□□□□ -1.76
SHFQ7M4L6 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SHFQ7M4L6 U3.53-201ENST00000628922 216 ntBASIC4.05□□□□□ -1.76
SHFQ7M4L6 AC092192.1-201ENST00000633154 1018 ntBASIC4.05□□□□□ -1.76
SHFQ7M4L6 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHFQ7M4L6 AL451142.2-201ENST00000429076 2090 ntBASIC4.05□□□□□ -1.76
SHFQ7M4L6 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHFQ7M4L6 MTCO1P14-201ENST00000441695 1559 ntBASIC4.05□□□□□ -1.76
SHFQ7M4L6 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
SHFQ7M4L6 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SHFQ7M4L6 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHFQ7M4L6 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.05□□□□□ -1.76
SHFQ7M4L6 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.05□□□□□ -1.76
SHFQ7M4L6 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 SDAD1P1-202ENST00000524156 2051 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 ZNF137P-201ENST00000456718 1920 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHFQ7M4L6 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHFQ7M4L6 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 Y_RNA.201-201ENST00000364052 96 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 SNORD74.4-201ENST00000364129 80 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 RNU6-374P-201ENST00000364146 108 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 MT-TH-201ENST00000387441 69 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHFQ7M4L6 SNRPEP2-201ENST00000397592 279 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SHFQ7M4L6 RNA5SP113-201ENST00000410486 84 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 RPS15AP38-201ENST00000413110 372 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 COX6B1P1-201ENST00000415962 213 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SHFQ7M4L6 RPS3AP9-201ENST00000417027 792 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 AL953862.1-201ENST00000423016 168 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SHFQ7M4L6 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 RPL12P46-201ENST00000436610 195 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 USP9YP10-201ENST00000454868 628 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 MTCO3P2-201ENST00000457365 171 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 ARPC3P2-201ENST00000457786 533 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 AC092757.1-201ENST00000467293 467 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 AC010301.1-201ENST00000473936 355 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 AC087879.1-201ENST00000474343 374 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 RPL7AP6-201ENST00000477943 801 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 RPL7P16-201ENST00000479738 738 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 IGLV2-34-201ENST00000490007 283 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 AL024509.2-201ENST00000493462 493 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 AC008897.1-201ENST00000494006 347 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 MTATP6P22-201ENST00000507369 598 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 AC090071.1-201ENST00000507713 644 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 USP9YP5-201ENST00000511770 630 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 RN7SKP276-201ENST00000516242 268 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SHFQ7M4L6 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHFQ7M4L6 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.04□□□□□ -1.76
SHFQ7M4L6 MIR4504-201ENST00000577413 92 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 MIR4716-201ENST00000579628 84 ntBASIC4.04□□□□□ -1.76
SHFQ7M4L6 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms