Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC108941.1-201ENST00000502853 530 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 AC006499.6-201ENST00000511169 607 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 PTGES3P3-201ENST00000511479 482 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 HNRNPKP5-201ENST00000515300 253 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 RN7SKP276-201ENST00000516242 268 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 IGKV2D-36-201ENST00000518643 226 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 AC090151.1-201ENST00000520784 730 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 LARP7P2-201ENST00000575306 125 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 RN7SL652P-201ENST00000577769 300 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 MIR4700-201ENST00000578311 74 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 AC073091.2-201ENST00000603205 907 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 AL391358.1-201ENST00000605342 190 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 AC090116.1-201ENST00000615679 446 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 CYP3A51P-201ENST00000633513 256 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC38Q502W7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CCDC38Q502W7 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC38Q502W7 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC38Q502W7 AC135352.1-201ENST00000506173 1418 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 AL136964.1-201ENST00000622038 2990 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC38Q502W7 AC011266.1-201ENST00000624119 3569 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 ZNF542P-204ENST00000482727 1305 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 SGO1P2-201ENST00000429458 1589 ntBASIC4.7□□□□□ -1.66
CCDC38Q502W7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC38Q502W7 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC38Q502W7 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC38Q502W7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC38Q502W7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 MTND5P24-201ENST00000438892 1767 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC38Q502W7 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC38Q502W7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC38Q502W7 RNU6-374P-201ENST00000364146 108 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 RNVU1-3-201ENST00000364313 161 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 ATP5F1P4-201ENST00000397288 746 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC38Q502W7 USP9YP33-201ENST00000412220 421 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 AC104837.2-201ENST00000427236 424 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 RPS27AP12-201ENST00000429552 465 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 CKS1BP5-201ENST00000434172 273 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 VN1R54P-201ENST00000435210 1049 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 USP9YP35-201ENST00000435696 412 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 RPL23AP74-201ENST00000437246 471 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 RPL7P28-201ENST00000437739 740 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 AL354941.1-201ENST00000438600 464 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 MTND1P26-201ENST00000440488 538 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 MTCO3P11-201ENST00000455103 774 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 AC026410.2-201ENST00000460281 156 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 RPS3AP41-201ENST00000462701 778 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 PLGLA-201ENST00000465668 449 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 AC108078.3-201ENST00000502633 489 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 OR5H5P-201ENST00000503164 928 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 XKRY-201ENST00000510392 1100 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 OR7H2P-201ENST00000513483 306 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC38Q502W7 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC38Q502W7 MRPS36P5-201ENST00000551909 298 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 AL133457.1-201ENST00000564251 987 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 AC008751.2-201ENST00000597885 980 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 AL139344.1-201ENST00000605228 195 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC38Q502W7 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 AC100827.5-201ENST00000615883 426 ntBASIC4.69□□□□□ -1.66
CCDC38Q502W7 AL136981.2-201ENST00000617319 734 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms