Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC58Q4VC31 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC58Q4VC31 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC58Q4VC31 RPL21P39-201ENST00000463605 483 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AC091564.1-201ENST00000464563 479 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AC011979.1-201ENST00000472300 483 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 RPL21P93-201ENST00000480465 489 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AC233702.1-201ENST00000482905 502 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AC087190.1-201ENST00000484462 480 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AC093591.1-201ENST00000491435 481 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 RPL21P129-201ENST00000491732 478 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 RPL21P16-201ENST00000495531 483 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 RPL23AP55-201ENST00000498163 452 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 HMGN1P11-201ENST00000508668 303 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
CCDC58Q4VC31 RNA5SP217-201ENST00000515959 91 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AL023583.1-201ENST00000607518 1143 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AC069234.5-201ENST00000611056 416 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AL356321.1-201ENST00000621360 228 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 MIR6733-201ENST00000635723 61 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC58Q4VC31 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC58Q4VC31 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC58Q4VC31 CR383658.2-201ENST00000547576 1525 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC58Q4VC31 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CCDC58Q4VC31 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC58Q4VC31 AL353743.1-202ENST00000431724 1695 ntBASIC2.96□□□□□ -1.94
CCDC58Q4VC31 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC58Q4VC31 U3.6-201ENST00000363622 211 ntBASIC2.96□□□□□ -1.94
CCDC58Q4VC31 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.96□□□□□ -1.94
CCDC58Q4VC31 EI24P1-201ENST00000416584 867 ntBASIC2.96□□□□□ -1.94
CCDC58Q4VC31 RFESDP1-201ENST00000422350 461 ntBASIC2.96□□□□□ -1.94
CCDC58Q4VC31 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.96□□□□□ -1.94
CCDC58Q4VC31 CST9LP2-201ENST00000437612 320 ntBASIC2.96□□□□□ -1.94
CCDC58Q4VC31 TPT1P12-201ENST00000448968 492 ntBASIC2.96□□□□□ -1.94
CCDC58Q4VC31 RPL7P52-201ENST00000449200 742 ntBASIC2.96□□□□□ -1.94
CCDC58Q4VC31 ST13P14-201ENST00000474095 734 ntBASIC2.96□□□□□ -1.94
CCDC58Q4VC31 HSPD1P15-201ENST00000505573 1122 ntBASIC2.96□□□□□ -1.94
CCDC58Q4VC31 MTCO1P35-201ENST00000515270 228 ntBASIC2.96□□□□□ -1.94
CCDC58Q4VC31 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC58Q4VC31 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC58Q4VC31 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC58Q4VC31 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC58Q4VC31 SETP2-201ENST00000553886 926 ntBASIC2.96□□□□□ -1.94
CCDC58Q4VC31 PARP1P2-201ENST00000556806 195 ntBASIC2.96□□□□□ -1.94
CCDC58Q4VC31 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC2.96□□□□□ -1.94
CCDC58Q4VC31 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC58Q4VC31 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC58Q4VC31 MIR5685-201ENST00000579080 79 ntBASIC2.96□□□□□ -1.94
CCDC58Q4VC31 AC006116.7-201ENST00000590141 756 ntBASIC2.96□□□□□ -1.94
CCDC58Q4VC31 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC58Q4VC31 AC010591.1-201ENST00000603941 649 ntBASIC2.96□□□□□ -1.94
CCDC58Q4VC31 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
CCDC58Q4VC31 AC116563.2-201ENST00000624751 535 ntBASIC2.96□□□□□ -1.94
CCDC58Q4VC31 RNA5SP196-201ENST00000625967 102 ntBASIC2.96□□□□□ -1.94
CCDC58Q4VC31 AC096656.1-201ENST00000623826 1364 ntBASIC2.96□□□□□ -1.94
CCDC58Q4VC31 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 AL357075.1-201ENST00000404107 726 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 AC004022.2-201ENST00000413824 193 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 SSXP9-201ENST00000417503 292 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 DBIP2-201ENST00000419076 262 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 TEX41-203ENST00000420472 765 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 CYCSP4-201ENST00000429682 331 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 AC016712.1-201ENST00000431088 378 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 NOTCH2P1-201ENST00000443481 624 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 RPL37P6-202ENST00000464216 403 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 AC146507.1-201ENST00000468335 354 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 GAPDHP36-201ENST00000480688 918 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC58Q4VC31 RNA5SP76-201ENST00000516277 87 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 RNU1-143P-201ENST00000516296 146 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 SNORA70.18-201ENST00000516696 98 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 SNORD59.2-201ENST00000516873 68 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 RN7SKP234-201ENST00000517173 224 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 SCARNA20.6-201ENST00000517251 106 ntBASIC2.95□□□□□ -1.94
CCDC58Q4VC31 RNU6-711P-201ENST00000517255 106 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms