Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC111193.1-201ENST00000504097 155 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 AC027338.1-201ENST00000514840 825 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.34□□□□□ -1.87
RFX4Q33E94 AC093331.1-201ENST00000521474 169 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.34□□□□□ -1.87
RFX4Q33E94 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.34□□□□□ -1.87
RFX4Q33E94 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RFX4Q33E94 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RFX4Q33E94 AP004242.1-201ENST00000533701 349 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 DUXAP6-201ENST00000553858 601 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 ZNF192P1-203ENST00000565888 810 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 AC106734.1-201ENST00000568646 663 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.34□□□□□ -1.87
RFX4Q33E94 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.34□□□□□ -1.87
RFX4Q33E94 AL606490.9-201ENST00000603331 271 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 AC083809.1-201ENST00000615051 472 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.34□□□□□ -1.87
RFX4Q33E94 ZNF542P-204ENST00000482727 1305 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 MFSD8-213ENST00000641134 1327 ntBASIC3.34□□□□□ -1.87
RFX4Q33E94 USP8P1-201ENST00000494673 3183 ntBASIC3.34□□□□□ -1.88
RFX4Q33E94 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RFX4Q33E94 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RFX4Q33E94 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RFX4Q33E94 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RFX4Q33E94 AC007496.3-201ENST00000624987 3443 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.33□□□□□ -1.88
RFX4Q33E94 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RFX4Q33E94 RNA5SP383-201ENST00000362934 120 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RFX4Q33E94 AL590290.1-201ENST00000405336 380 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 Y_RNA.625-201ENST00000411256 107 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.33□□□□□ -1.88
RFX4Q33E94 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RFX4Q33E94 AL513174.1-201ENST00000423182 629 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 OR8F1P-201ENST00000425243 930 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 AL117339.2-201ENST00000430475 180 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 B3GNT2P1-201ENST00000434960 952 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 AC105402.2-201ENST00000438503 358 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 RPS7P5-201ENST00000441482 581 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.33□□□□□ -1.88
RFX4Q33E94 AC125238.1-201ENST00000448842 249 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.33□□□□□ -1.88
RFX4Q33E94 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.33□□□□□ -1.88
RFX4Q33E94 RPS27P29-201ENST00000463110 252 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 AC078857.1-201ENST00000469870 667 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 AC084357.1-201ENST00000473404 255 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 AP000563.1-201ENST00000490865 758 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 RN7SL323P-201ENST00000494712 295 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 AL035404.1-201ENST00000497982 568 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.33□□□□□ -1.88
RFX4Q33E94 AC023141.12-201ENST00000512399 199 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.33□□□□□ -1.88
RFX4Q33E94 SNORA70.19-201ENST00000516717 90 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 SCARNA14-201ENST00000516903 136 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 HMGB1P23-201ENST00000518743 568 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.33□□□□□ -1.88
RFX4Q33E94 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.33□□□□□ -1.88
RFX4Q33E94 AC006518.1-201ENST00000541449 943 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 AC026333.2-201ENST00000542164 106 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 AC008011.1-201ENST00000545989 227 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.33□□□□□ -1.88
RFX4Q33E94 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.33□□□□□ -1.88
RFX4Q33E94 AC069304.3-201ENST00000603938 1084 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 RPL21P136-201ENST00000605378 396 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.33□□□□□ -1.88
RFX4Q33E94 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.33□□□□□ -1.88
RFX4Q33E94 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RFX4Q33E94 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RFX4Q33E94 MTND4P31-201ENST00000425607 1343 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RFX4Q33E94 HSPA8P19-201ENST00000505359 1517 ntBASIC3.33□□□□□ -1.88
RFX4Q33E94 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RFX4Q33E94 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.32□□□□□ -1.88
RFX4Q33E94 AC005183.1-201ENST00000603687 1979 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RFX4Q33E94 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RFX4Q33E94 AP001148.1-201ENST00000624124 2359 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RFX4Q33E94 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.32□□□□□ -1.88
RFX4Q33E94 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RFX4Q33E94 MIR372-201ENST00000362225 67 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.32□□□□□ -1.88
RFX4Q33E94 RNU6-481P-201ENST00000384194 107 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 SOD2P1-201ENST00000396543 562 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.32□□□□□ -1.88
RFX4Q33E94 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.32□□□□□ -1.88
RFX4Q33E94 AP000907.1-201ENST00000428428 510 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 RPL23AP22-201ENST00000437556 453 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.32□□□□□ -1.88
RFX4Q33E94 HSFY6P-201ENST00000445573 403 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.32□□□□□ -1.88
RFX4Q33E94 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RFX4Q33E94 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.32□□□□□ -1.88
RFX4Q33E94 HMGN1P18-201ENST00000457642 277 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 UBDP1-202ENST00000457888 382 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 AC023598.1-201ENST00000472521 361 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 RPL23AP44-201ENST00000482216 473 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 AC078918.1-201ENST00000498515 228 ntBASIC3.32□□□□□ -1.88
RFX4Q33E94 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms