Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 MTND3P12-201ENST00000559068 328 ntBASIC4.51□□□□□ -1.69
PDS5AQ29RF7 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.51□□□□□ -1.69
PDS5AQ29RF7 AC244505.7-201ENST00000599675 272 ntBASIC4.51□□□□□ -1.69
PDS5AQ29RF7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.51□□□□□ -1.69
PDS5AQ29RF7 AC113368.1-201ENST00000603736 382 ntBASIC4.51□□□□□ -1.69
PDS5AQ29RF7 AC025811.1-201ENST00000604312 472 ntBASIC4.51□□□□□ -1.69
PDS5AQ29RF7 AC013468.1-201ENST00000608680 598 ntBASIC4.51□□□□□ -1.69
PDS5AQ29RF7 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
PDS5AQ29RF7 AL138478.1-201ENST00000612252 832 ntBASIC4.51□□□□□ -1.69
PDS5AQ29RF7 AC145207.9-201ENST00000623802 325 ntBASIC4.51□□□□□ -1.69
PDS5AQ29RF7 AC068057.2-201ENST00000624047 895 ntBASIC4.51□□□□□ -1.69
PDS5AQ29RF7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.51□□□□□ -1.69
PDS5AQ29RF7 AC017104.5-201ENST00000637647 639 ntBASIC4.51□□□□□ -1.69
PDS5AQ29RF7 AP000553.6-201ENST00000641242 118 ntBASIC4.51□□□□□ -1.69
PDS5AQ29RF7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDS5AQ29RF7 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDS5AQ29RF7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDS5AQ29RF7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.51□□□□□ -1.69
PDS5AQ29RF7 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDS5AQ29RF7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDS5AQ29RF7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PDS5AQ29RF7 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PDS5AQ29RF7 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDS5AQ29RF7 BDP1P-201ENST00000582658 1990 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 RNU6-543P-201ENST00000362576 108 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 MIR320B1-201ENST00000390209 79 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 RPS7P9-201ENST00000414704 586 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 LINC01881-201ENST00000416103 412 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 RPL22P18-201ENST00000417197 377 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 MTCO2P21-201ENST00000419780 677 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 AC246680.2-201ENST00000422106 389 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 HIGD1AP12-201ENST00000427832 281 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 AC087650.1-201ENST00000431445 468 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 MTCO2P20-201ENST00000437339 673 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 AC092170.1-201ENST00000440211 356 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 AC091153.1-201ENST00000466297 402 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 BOLA3P3-201ENST00000505182 232 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 AC009097.3-201ENST00000563557 1018 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 AC122134.1-201ENST00000565664 1104 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 ATP5F1P7-201ENST00000567330 760 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 AL035411.2-201ENST00000604022 421 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 AC019226.2-201ENST00000625973 424 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 GTF2H2B-203ENST00000508065 1432 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 SEC63P2-201ENST00000503863 1939 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDS5AQ29RF7 MTND4P8-201ENST00000514997 1362 ntBASIC4.5□□□□□ -1.69
PDS5AQ29RF7 RNU6-549P-201ENST00000384433 107 ntBASIC4.49□□□□□ -1.69
PDS5AQ29RF7 MIR513B-201ENST00000385136 84 ntBASIC4.49□□□□□ -1.69
PDS5AQ29RF7 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PDS5AQ29RF7 HMGB3P18-201ENST00000406327 590 ntBASIC4.49□□□□□ -1.69
PDS5AQ29RF7 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.49□□□□□ -1.69
PDS5AQ29RF7 RNU4-22P-201ENST00000411058 166 ntBASIC4.49□□□□□ -1.69
PDS5AQ29RF7 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.49□□□□□ -1.69
PDS5AQ29RF7 RAC1P3-201ENST00000416129 580 ntBASIC4.49□□□□□ -1.69
PDS5AQ29RF7 KRR1P1-201ENST00000419430 803 ntBASIC4.49□□□□□ -1.69
PDS5AQ29RF7 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.49□□□□□ -1.69
PDS5AQ29RF7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.49□□□□□ -1.69
PDS5AQ29RF7 CYCSP43-201ENST00000438233 310 ntBASIC4.49□□□□□ -1.69
PDS5AQ29RF7 MTCYBP31-201ENST00000438855 1122 ntBASIC4.49□□□□□ -1.69
PDS5AQ29RF7 Z77249.1-201ENST00000444622 1175 ntBASIC4.49□□□□□ -1.69
PDS5AQ29RF7 AC004022.1-201ENST00000447766 1066 ntBASIC4.49□□□□□ -1.69
PDS5AQ29RF7 AC073387.1-201ENST00000453261 709 ntBASIC4.49□□□□□ -1.69
PDS5AQ29RF7 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDS5AQ29RF7 AC244505.3-201ENST00000454598 187 ntBASIC4.49□□□□□ -1.69
PDS5AQ29RF7 PTGES3P5-201ENST00000455109 434 ntBASIC4.49□□□□□ -1.69
PDS5AQ29RF7 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.49□□□□□ -1.69
PDS5AQ29RF7 AC023050.1-201ENST00000498198 304 ntBASIC4.49□□□□□ -1.69
PDS5AQ29RF7 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.49□□□□□ -1.69
PDS5AQ29RF7 SUMO2P20-201ENST00000520803 283 ntBASIC4.49□□□□□ -1.69
PDS5AQ29RF7 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.49□□□□□ -1.69
PDS5AQ29RF7 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.49□□□□□ -1.69
PDS5AQ29RF7 PDCD5P1-201ENST00000543528 309 ntBASIC4.49□□□□□ -1.69
PDS5AQ29RF7 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.49□□□□□ -1.69
PDS5AQ29RF7 AC025260.1-201ENST00000548858 430 ntBASIC4.49□□□□□ -1.69
PDS5AQ29RF7 OR4U1P-201ENST00000554958 912 ntBASIC4.49□□□□□ -1.69
PDS5AQ29RF7 AC006960.3-201ENST00000561845 705 ntBASIC4.49□□□□□ -1.69
PDS5AQ29RF7 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.49□□□□□ -1.69
PDS5AQ29RF7 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms