Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC2.5□□□□□ -2.01
SSBP1Q04837 AC048347.1-201ENST00000624621 427 ntBASIC2.5□□□□□ -2.01
SSBP1Q04837 AC139713.2-210ENST00000641741 992 ntBASIC2.5□□□□□ -2.01
SSBP1Q04837 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SSBP1Q04837 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.5□□□□□ -2.01
SSBP1Q04837 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.5□□□□□ -2.01
SSBP1Q04837 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
SSBP1Q04837 AF127577.6-201ENST00000623352 2191 ntBASIC2.5□□□□□ -2.01
SSBP1Q04837 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.5□□□□□ -2.01
SSBP1Q04837 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.5□□□□□ -2.01
SSBP1Q04837 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.5□□□□□ -2.01
SSBP1Q04837 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SSBP1Q04837 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SSBP1Q04837 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SSBP1Q04837 RN7SKP280-201ENST00000364196 304 ntBASIC2.49□□□□□ -2.01
SSBP1Q04837 SNORD21-201ENST00000383953 95 ntBASIC2.49□□□□□ -2.01
SSBP1Q04837 SNORA5A-201ENST00000384111 134 ntBASIC2.49□□□□□ -2.01
SSBP1Q04837 SYF2P2-201ENST00000417620 583 ntBASIC2.49□□□□□ -2.01
SSBP1Q04837 MTND2P16-201ENST00000419987 799 ntBASIC2.49□□□□□ -2.01
SSBP1Q04837 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC2.49□□□□□ -2.01
SSBP1Q04837 KCTD10P1-201ENST00000434203 625 ntBASIC2.49□□□□□ -2.01
SSBP1Q04837 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.49□□□□□ -2.01
SSBP1Q04837 RPL26P28-201ENST00000451325 435 ntBASIC2.49□□□□□ -2.01
SSBP1Q04837 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.49□□□□□ -2.01
SSBP1Q04837 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.49□□□□□ -2.01
SSBP1Q04837 RN7SL385P-201ENST00000468873 276 ntBASIC2.49□□□□□ -2.01
SSBP1Q04837 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.49□□□□□ -2.01
SSBP1Q04837 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.49□□□□□ -2.01
SSBP1Q04837 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.49□□□□□ -2.01
SSBP1Q04837 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SSBP1Q04837 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.49□□□□□ -2.01
SSBP1Q04837 NCAPGP2-201ENST00000557911 754 ntBASIC2.49□□□□□ -2.01
SSBP1Q04837 AC007224.1-201ENST00000564410 144 ntBASIC2.49□□□□□ -2.01
SSBP1Q04837 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.49□□□□□ -2.01
SSBP1Q04837 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.49□□□□□ -2.01
SSBP1Q04837 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
SSBP1Q04837 AC005242.1-201ENST00000585658 438 ntBASIC2.49□□□□□ -2.01
SSBP1Q04837 AC078899.3-201ENST00000599065 212 ntBASIC2.49□□□□□ -2.01
SSBP1Q04837 AC067959.1-201ENST00000604334 379 ntBASIC2.49□□□□□ -2.01
SSBP1Q04837 AL356274.1-201ENST00000617064 410 ntBASIC2.49□□□□□ -2.01
SSBP1Q04837 AC091953.5-201ENST00000622919 233 ntBASIC2.49□□□□□ -2.01
SSBP1Q04837 FRG1DP-201ENST00000635586 771 ntBASIC2.49□□□□□ -2.01
SSBP1Q04837 MFSD8-220ENST00000641243 1422 ntBASIC2.49□□□□□ -2.01
SSBP1Q04837 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SSBP1Q04837 API5P2-201ENST00000397055 1498 ntBASIC2.48□□□□□ -2.01
SSBP1Q04837 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SSBP1Q04837 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SSBP1Q04837 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.48□□□□□ -2.01
SSBP1Q04837 MIR181A2-201ENST00000384863 110 ntBASIC2.48□□□□□ -2.01
SSBP1Q04837 SNORD67-201ENST00000390833 111 ntBASIC2.48□□□□□ -2.01
SSBP1Q04837 TAF9BP1-201ENST00000396646 746 ntBASIC2.48□□□□□ -2.01
SSBP1Q04837 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.48□□□□□ -2.01
SSBP1Q04837 HSFY4P-201ENST00000415994 1181 ntBASIC2.48□□□□□ -2.01
SSBP1Q04837 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.48□□□□□ -2.01
SSBP1Q04837 HSPD1P21-201ENST00000436541 245 ntBASIC2.48□□□□□ -2.01
SSBP1Q04837 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.48□□□□□ -2.01
SSBP1Q04837 AL590399.6-201ENST00000446396 307 ntBASIC2.48□□□□□ -2.01
SSBP1Q04837 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.48□□□□□ -2.01
SSBP1Q04837 AC016687.1-201ENST00000482574 353 ntBASIC2.48□□□□□ -2.01
SSBP1Q04837 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.48□□□□□ -2.01
SSBP1Q04837 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SSBP1Q04837 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.48□□□□□ -2.01
SSBP1Q04837 MTCO1P49-201ENST00000523429 802 ntBASIC2.48□□□□□ -2.01
SSBP1Q04837 OR4A45P-201ENST00000529954 901 ntBASIC2.48□□□□□ -2.01
SSBP1Q04837 OR5B10P-201ENST00000532869 642 ntBASIC2.48□□□□□ -2.01
SSBP1Q04837 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SSBP1Q04837 AC004486.1-201ENST00000546846 233 ntBASIC2.48□□□□□ -2.01
SSBP1Q04837 AC010653.1-201ENST00000571108 881 ntBASIC2.48□□□□□ -2.01
SSBP1Q04837 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.48□□□□□ -2.01
SSBP1Q04837 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC2.48□□□□□ -2.01
SSBP1Q04837 AL590392.1-201ENST00000604960 446 ntBASIC2.48□□□□□ -2.01
SSBP1Q04837 AL355365.1-201ENST00000616480 294 ntBASIC2.48□□□□□ -2.01
SSBP1Q04837 AL392088.2-201ENST00000637607 285 ntBASIC2.48□□□□□ -2.01
SSBP1Q04837 SYT14P1-202ENST00000600441 1448 ntBASIC2.48□□□□□ -2.01
SSBP1Q04837 ZNF285B-201ENST00000561698 1767 ntBASIC2.48□□□□□ -2.01
SSBP1Q04837 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SSBP1Q04837 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SSBP1Q04837 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
SSBP1Q04837 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SSBP1Q04837 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.47□□□□□ -2.01
SSBP1Q04837 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
SSBP1Q04837 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SSBP1Q04837 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SSBP1Q04837 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SSBP1Q04837 SNORA9.2-201ENST00000365361 133 ntBASIC2.47□□□□□ -2.01
SSBP1Q04837 AL353692.2-201ENST00000407054 335 ntBASIC2.47□□□□□ -2.01
SSBP1Q04837 RNU4-47P-201ENST00000410876 114 ntBASIC2.47□□□□□ -2.01
SSBP1Q04837 AC063979.1-201ENST00000415539 377 ntBASIC2.47□□□□□ -2.01
SSBP1Q04837 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.47□□□□□ -2.01
SSBP1Q04837 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.47□□□□□ -2.01
SSBP1Q04837 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.47□□□□□ -2.01
SSBP1Q04837 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.47□□□□□ -2.01
SSBP1Q04837 ST13P20-201ENST00000447996 1065 ntBASIC2.47□□□□□ -2.01
SSBP1Q04837 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC2.47□□□□□ -2.01
SSBP1Q04837 AL162389.1-201ENST00000449233 177 ntBASIC2.47□□□□□ -2.01
SSBP1Q04837 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.47□□□□□ -2.01
SSBP1Q04837 RPL21P10-201ENST00000463521 490 ntBASIC2.47□□□□□ -2.01
SSBP1Q04837 AC103975.1-201ENST00000482506 483 ntBASIC2.47□□□□□ -2.01
SSBP1Q04837 AC026412.2-201ENST00000512270 1075 ntBASIC2.47□□□□□ -2.01
SSBP1Q04837 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms