Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
IRF9Q00978 AC005522.1-201ENST00000395416 346 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.08□□□□□ -1.6
IRF9Q00978 RNU2-21P-201ENST00000410368 188 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 NPM1P4-201ENST00000414095 812 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 NUP35P2-201ENST00000416748 943 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 CCDC58P2-201ENST00000417131 366 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 PIGFP2-201ENST00000421400 651 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.08□□□□□ -1.6
IRF9Q00978 AL139148.1-201ENST00000427122 680 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 RPS26P47-201ENST00000427219 348 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 HMGB1P31-201ENST00000437242 427 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 AL512326.1-201ENST00000443050 721 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 NFU1P2-201ENST00000448700 469 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 SIAH1P1-201ENST00000479411 923 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 RN7SL809P-201ENST00000482040 297 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 RPS3AP14-201ENST00000483907 780 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 RN7SL466P-201ENST00000497546 295 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.08□□□□□ -1.6
IRF9Q00978 AC009646.1-201ENST00000510455 318 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.08□□□□□ -1.6
IRF9Q00978 AC074344.1-201ENST00000512823 224 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 AC010493.1-201ENST00000513479 292 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.08□□□□□ -1.6
IRF9Q00978 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.08□□□□□ -1.6
IRF9Q00978 OR5AQ1P-201ENST00000527596 927 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 FAM92A1P1-201ENST00000528023 890 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
IRF9Q00978 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.08□□□□□ -1.6
IRF9Q00978 AC022404.1-201ENST00000555320 273 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 AC009852.2-201ENST00000567898 485 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 AC011840.5-201ENST00000582125 771 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 AL139286.1-201ENST00000604465 483 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.08□□□□□ -1.6
IRF9Q00978 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.08□□□□□ -1.6
IRF9Q00978 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
IRF9Q00978 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.08□□□□□ -1.6
IRF9Q00978 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.08□□□□□ -1.6
IRF9Q00978 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
IRF9Q00978 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
IRF9Q00978 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.08□□□□□ -1.6
IRF9Q00978 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
IRF9Q00978 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
IRF9Q00978 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
IRF9Q00978 AC125336.1-201ENST00000508893 2827 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 AL031119.1-201ENST00000404707 1879 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
IRF9Q00978 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
IRF9Q00978 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
IRF9Q00978 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.07□□□□□ -1.6
IRF9Q00978 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
IRF9Q00978 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
IRF9Q00978 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
IRF9Q00978 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
IRF9Q00978 AC013442.1-201ENST00000397347 228 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 RPS3AP24-201ENST00000407896 734 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 RN7SKP229-201ENST00000410465 302 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.07□□□□□ -1.6
IRF9Q00978 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.07□□□□□ -1.6
IRF9Q00978 AC079355.1-201ENST00000421770 223 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.07□□□□□ -1.6
IRF9Q00978 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.07□□□□□ -1.6
IRF9Q00978 CEACAMP1-201ENST00000434624 1035 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 AL121601.2-201ENST00000438019 707 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 MTCO3P18-201ENST00000440206 761 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 BTF3P6-201ENST00000448054 499 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.07□□□□□ -1.6
IRF9Q00978 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.07□□□□□ -1.6
IRF9Q00978 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
IRF9Q00978 AC023141.9-201ENST00000458734 412 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 AC091180.1-201ENST00000462104 372 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 PLGLA-201ENST00000465668 449 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 AC087312.1-201ENST00000471411 480 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.07□□□□□ -1.6
IRF9Q00978 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.07□□□□□ -1.6
IRF9Q00978 AC093767.1-201ENST00000504523 156 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.07□□□□□ -1.6
IRF9Q00978 TXNP6-201ENST00000510190 310 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 RNU6-528P-201ENST00000516926 100 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 RNU6-201P-201ENST00000517100 61 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 AC012400.1-201ENST00000518452 381 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 AC105031.1-201ENST00000518550 476 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 AC022616.6-201ENST00000520479 119 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 AP003181.2-201ENST00000528941 181 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.07□□□□□ -1.6
IRF9Q00978 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.07□□□□□ -1.6
IRF9Q00978 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.07□□□□□ -1.6
IRF9Q00978 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.07□□□□□ -1.6
IRF9Q00978 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.07□□□□□ -1.6
IRF9Q00978 AL121579.1-201ENST00000555129 305 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.07□□□□□ -1.6
IRF9Q00978 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.07□□□□□ -1.6
IRF9Q00978 HMGB1P33-201ENST00000563485 527 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 AC053481.3-201ENST00000577881 843 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 SNORD95-201ENST00000579879 68 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.07□□□□□ -1.6
IRF9Q00978 AP000907.4-201ENST00000604143 237 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.07□□□□□ -1.6
IRF9Q00978 AC011451.2-201ENST00000604303 598 ntBASIC5.07□□□□□ -1.6
IRF9Q00978 MIR6768-201ENST00000610734 72 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms