Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
RPS28P62857 OMA1-201ENST00000371226 1935 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RPS28P62857 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RPS28P62857 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RPS28P62857 AC008669.1-201ENST00000565823 2178 ntBASIC1.98□□□□□ -2.09
RPS28P62857 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC1.98□□□□□ -2.09
RPS28P62857 RPL11P4-201ENST00000332269 436 ntBASIC1.98□□□□□ -2.09
RPS28P62857 RNA5SP308-201ENST00000362532 115 ntBASIC1.98□□□□□ -2.09
RPS28P62857 RNU6-989P-201ENST00000362756 107 ntBASIC1.98□□□□□ -2.09
RPS28P62857 RNU6-461P-201ENST00000364195 107 ntBASIC1.98□□□□□ -2.09
RPS28P62857 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
RPS28P62857 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RPS28P62857 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC1.98□□□□□ -2.09
RPS28P62857 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC1.98□□□□□ -2.09
RPS28P62857 RNU11-4P-201ENST00000391149 133 ntBASIC1.98□□□□□ -2.09
RPS28P62857 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RPS28P62857 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC1.98□□□□□ -2.09
RPS28P62857 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.98□□□□□ -2.09
RPS28P62857 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.98□□□□□ -2.09
RPS28P62857 EZH2P1-201ENST00000431167 291 ntBASIC1.98□□□□□ -2.09
RPS28P62857 NDUFB1P1-201ENST00000435191 180 ntBASIC1.98□□□□□ -2.09
RPS28P62857 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC1.98□□□□□ -2.09
RPS28P62857 AL445687.1-201ENST00000439946 251 ntBASIC1.98□□□□□ -2.09
RPS28P62857 MEG8-205ENST00000442197 625 ntTSL 2 BASIC1.98□□□□□ -2.09
RPS28P62857 AL121871.1-201ENST00000443413 436 ntBASIC1.98□□□□□ -2.09
RPS28P62857 HMGB3P6-201ENST00000444896 598 ntBASIC1.98□□□□□ -2.09
RPS28P62857 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.98□□□□□ -2.09
RPS28P62857 AC233982.1-201ENST00000451247 436 ntBASIC1.98□□□□□ -2.09
RPS28P62857 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.98□□□□□ -2.09
RPS28P62857 AC010618.1-201ENST00000469924 477 ntBASIC1.98□□□□□ -2.09
RPS28P62857 AC084357.1-201ENST00000473404 255 ntBASIC1.98□□□□□ -2.09
RPS28P62857 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RPS28P62857 AL135752.1-201ENST00000479477 471 ntBASIC1.98□□□□□ -2.09
RPS28P62857 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC1.98□□□□□ -2.09
RPS28P62857 RN7SL244P-201ENST00000493405 297 ntBASIC1.98□□□□□ -2.09
RPS28P62857 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC1.98□□□□□ -2.09
RPS28P62857 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.98□□□□□ -2.09
RPS28P62857 AC108941.1-201ENST00000502853 530 ntBASIC1.98□□□□□ -2.09
RPS28P62857 CBX3P3-201ENST00000508108 532 ntBASIC1.98□□□□□ -2.09
RPS28P62857 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RPS28P62857 RNA5SP402-201ENST00000517148 110 ntBASIC1.98□□□□□ -2.09
RPS28P62857 HMGB1P23-201ENST00000518743 568 ntBASIC1.98□□□□□ -2.09
RPS28P62857 OR5G4P-201ENST00000525251 760 ntBASIC1.98□□□□□ -2.09
RPS28P62857 AC027544.3-201ENST00000535082 757 ntBASIC1.98□□□□□ -2.09
RPS28P62857 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC1.98□□□□□ -2.09
RPS28P62857 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.98□□□□□ -2.09
RPS28P62857 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC1.98□□□□□ -2.09
RPS28P62857 AC126177.3-201ENST00000551839 688 ntBASIC1.98□□□□□ -2.09
RPS28P62857 AC121758.2-201ENST00000553271 193 ntBASIC1.98□□□□□ -2.09
RPS28P62857 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC1.98□□□□□ -2.09
RPS28P62857 AL049874.4-201ENST00000557593 255 ntBASIC1.98□□□□□ -2.09
RPS28P62857 AC006960.3-201ENST00000561845 705 ntBASIC1.98□□□□□ -2.09
RPS28P62857 EIF5A2P1-201ENST00000564027 460 ntBASIC1.98□□□□□ -2.09
RPS28P62857 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC1.98□□□□□ -2.09
RPS28P62857 AMZ2P1-203ENST00000565833 850 ntBASIC1.98□□□□□ -2.09
RPS28P62857 RN7SL652P-201ENST00000577769 300 ntBASIC1.98□□□□□ -2.09
RPS28P62857 RN7SL66P-201ENST00000582099 264 ntBASIC1.98□□□□□ -2.09
RPS28P62857 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC1.98□□□□□ -2.09
RPS28P62857 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC1.98□□□□□ -2.09
RPS28P62857 AC060766.3-201ENST00000591442 263 ntBASIC1.98□□□□□ -2.09
RPS28P62857 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC1.98□□□□□ -2.09
RPS28P62857 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RPS28P62857 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC1.98□□□□□ -2.09
RPS28P62857 LINC01808-202ENST00000641680 1116 ntBASIC1.98□□□□□ -2.09
RPS28P62857 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.98□□□□□ -2.09
RPS28P62857 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
RPS28P62857 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RPS28P62857 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.98□□□□□ -2.09
RPS28P62857 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RPS28P62857 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC1.98□□□□□ -2.09
RPS28P62857 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
RPS28P62857 AC123912.3-201ENST00000600907 1367 ntBASIC1.98□□□□□ -2.09
RPS28P62857 MTND4P35-201ENST00000604257 1375 ntBASIC1.98□□□□□ -2.09
RPS28P62857 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC1.97□□□□□ -2.09
RPS28P62857 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
RPS28P62857 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
RPS28P62857 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RPS28P62857 AC010894.1-201ENST00000313760 361 ntBASIC1.97□□□□□ -2.09
RPS28P62857 AC079741.1-201ENST00000321498 212 ntBASIC1.97□□□□□ -2.09
RPS28P62857 RPL23AP57-201ENST00000332361 466 ntBASIC1.97□□□□□ -2.09
RPS28P62857 RNVU1-3-201ENST00000364313 161 ntBASIC1.97□□□□□ -2.09
RPS28P62857 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
RPS28P62857 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC1.97□□□□□ -2.09
RPS28P62857 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC1.97□□□□□ -2.09
RPS28P62857 RNU1-52P-201ENST00000384190 164 ntBASIC1.97□□□□□ -2.09
RPS28P62857 MIR592-201ENST00000384959 97 ntBASIC1.97□□□□□ -2.09
RPS28P62857 RNA5SP210-201ENST00000391034 120 ntBASIC1.97□□□□□ -2.09
RPS28P62857 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.97□□□□□ -2.09
RPS28P62857 GTF2IP5-201ENST00000414608 731 ntBASIC1.97□□□□□ -2.09
RPS28P62857 AL512504.1-201ENST00000415494 778 ntBASIC1.97□□□□□ -2.09
RPS28P62857 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC1.97□□□□□ -2.09
RPS28P62857 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC1.97□□□□□ -2.09
RPS28P62857 MORF4L1P6-201ENST00000418771 268 ntBASIC1.97□□□□□ -2.09
RPS28P62857 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.97□□□□□ -2.09
RPS28P62857 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC1.97□□□□□ -2.09
RPS28P62857 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC1.97□□□□□ -2.09
RPS28P62857 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC1.97□□□□□ -2.09
RPS28P62857 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC1.97□□□□□ -2.09
RPS28P62857 MRPS33P4-201ENST00000434892 317 ntBASIC1.97□□□□□ -2.09
RPS28P62857 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms