Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
AP1S1P61966 HSPD1P15-201ENST00000505573 1122 ntBASIC3.33□□□□□ -1.88
AP1S1P61966 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.33□□□□□ -1.88
AP1S1P61966 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
AP1S1P61966 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.33□□□□□ -1.88
AP1S1P61966 NPM1P35-201ENST00000533043 868 ntBASIC3.33□□□□□ -1.88
AP1S1P61966 AC025423.2-201ENST00000537570 439 ntBASIC3.33□□□□□ -1.88
AP1S1P61966 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.33□□□□□ -1.88
AP1S1P61966 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
AP1S1P61966 HIGD1AP1-201ENST00000550979 275 ntBASIC3.33□□□□□ -1.88
AP1S1P61966 CKS1BP3-201ENST00000600888 237 ntBASIC3.33□□□□□ -1.88
AP1S1P61966 AC018816.2-201ENST00000621460 353 ntBASIC3.33□□□□□ -1.88
AP1S1P61966 AC007342.8-201ENST00000623278 678 ntBASIC3.33□□□□□ -1.88
AP1S1P61966 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.33□□□□□ -1.88
AP1S1P61966 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.33□□□□□ -1.88
AP1S1P61966 DCAF13P1-201ENST00000495256 1330 ntBASIC3.33□□□□□ -1.88
AP1S1P61966 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
AP1S1P61966 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.33□□□□□ -1.88
AP1S1P61966 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
AP1S1P61966 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
AP1S1P61966 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.32□□□□□ -1.88
AP1S1P61966 AC007256.1-201ENST00000392253 2765 ntBASIC3.32□□□□□ -1.88
AP1S1P61966 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP1S1P61966 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP1S1P61966 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP1S1P61966 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
AP1S1P61966 RNU1-70P-201ENST00000362618 164 ntBASIC3.32□□□□□ -1.88
AP1S1P61966 RNVU1-14-201ENST00000384770 164 ntBASIC3.32□□□□□ -1.88
AP1S1P61966 MIR184-201ENST00000384962 84 ntBASIC3.32□□□□□ -1.88
AP1S1P61966 AC005300.1-201ENST00000428401 373 ntBASIC3.32□□□□□ -1.88
AP1S1P61966 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.32□□□□□ -1.88
AP1S1P61966 RPS7P5-201ENST00000441482 581 ntBASIC3.32□□□□□ -1.88
AP1S1P61966 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.32□□□□□ -1.88
AP1S1P61966 MRPS31P2-201ENST00000451581 518 ntBASIC3.32□□□□□ -1.88
AP1S1P61966 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.32□□□□□ -1.88
AP1S1P61966 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
AP1S1P61966 AC021678.1-201ENST00000505195 936 ntBASIC3.32□□□□□ -1.88
AP1S1P61966 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
AP1S1P61966 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC3.32□□□□□ -1.88
AP1S1P61966 FABP5P12-201ENST00000515543 389 ntBASIC3.32□□□□□ -1.88
AP1S1P61966 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.32□□□□□ -1.88
AP1S1P61966 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.32□□□□□ -1.88
AP1S1P61966 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.32□□□□□ -1.88
AP1S1P61966 AL162713.1-201ENST00000604480 262 ntBASIC3.32□□□□□ -1.88
AP1S1P61966 AC245389.2-201ENST00000616023 576 ntBASIC3.32□□□□□ -1.88
AP1S1P61966 AC242843.1-201ENST00000618702 573 ntBASIC3.32□□□□□ -1.88
AP1S1P61966 MTND5P1-201ENST00000445440 1375 ntBASIC3.32□□□□□ -1.88
AP1S1P61966 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.32□□□□□ -1.88
AP1S1P61966 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
AP1S1P61966 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
AP1S1P61966 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP1S1P61966 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.32□□□□□ -1.88
AP1S1P61966 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S1P61966 AC007496.3-201ENST00000624987 3443 ntBASIC3.31□□□□□ -1.88
AP1S1P61966 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.31□□□□□ -1.88
AP1S1P61966 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.31□□□□□ -1.88
AP1S1P61966 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
AP1S1P61966 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S1P61966 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
AP1S1P61966 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
AP1S1P61966 SNORD46.1-201ENST00000364139 104 ntBASIC3.31□□□□□ -1.88
AP1S1P61966 SNORA48.8-201ENST00000391324 134 ntBASIC3.31□□□□□ -1.88
AP1S1P61966 RNA5SP229-201ENST00000410809 99 ntBASIC3.31□□□□□ -1.88
AP1S1P61966 AL591503.2-201ENST00000442314 1005 ntBASIC3.31□□□□□ -1.88
AP1S1P61966 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.31□□□□□ -1.88
AP1S1P61966 Z99127.3-201ENST00000448158 395 ntBASIC3.31□□□□□ -1.88
AP1S1P61966 SLC31A1P1-201ENST00000451221 567 ntBASIC3.31□□□□□ -1.88
AP1S1P61966 AC092185.1-201ENST00000491371 97 ntBASIC3.31□□□□□ -1.88
AP1S1P61966 AC078817.1-201ENST00000492623 435 ntBASIC3.31□□□□□ -1.88
AP1S1P61966 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.31□□□□□ -1.88
AP1S1P61966 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.31□□□□□ -1.88
AP1S1P61966 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.31□□□□□ -1.88
AP1S1P61966 AP001636.2-201ENST00000525517 696 ntBASIC3.31□□□□□ -1.88
AP1S1P61966 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.31□□□□□ -1.88
AP1S1P61966 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.31□□□□□ -1.88
AP1S1P61966 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.31□□□□□ -1.88
AP1S1P61966 AL365503.1-201ENST00000605247 905 ntBASIC3.31□□□□□ -1.88
AP1S1P61966 AC009464.1-201ENST00000615731 469 ntBASIC3.31□□□□□ -1.88
AP1S1P61966 PLCE1P1-201ENST00000622094 305 ntBASIC3.31□□□□□ -1.88
AP1S1P61966 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.31□□□□□ -1.88
AP1S1P61966 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S1P61966 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S1P61966 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S1P61966 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
AP1S1P61966 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
AP1S1P61966 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
AP1S1P61966 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
AP1S1P61966 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.3□□□□□ -1.88
AP1S1P61966 AP002088.1-201ENST00000382740 395 ntBASIC3.3□□□□□ -1.88
AP1S1P61966 RNA5SP120-201ENST00000410900 112 ntBASIC3.3□□□□□ -1.88
AP1S1P61966 ETF1P3-201ENST00000430422 1160 ntBASIC3.3□□□□□ -1.88
AP1S1P61966 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.3□□□□□ -1.88
AP1S1P61966 CST9LP2-201ENST00000437612 320 ntBASIC3.3□□□□□ -1.88
AP1S1P61966 PTGES3P5-201ENST00000455109 434 ntBASIC3.3□□□□□ -1.88
AP1S1P61966 AC010401.1-201ENST00000463867 348 ntBASIC3.3□□□□□ -1.88
AP1S1P61966 RN7SL807P-201ENST00000470923 297 ntBASIC3.3□□□□□ -1.88
AP1S1P61966 AC087312.1-201ENST00000471411 480 ntBASIC3.3□□□□□ -1.88
AP1S1P61966 CYCSP20-201ENST00000473154 315 ntBASIC3.3□□□□□ -1.88
AP1S1P61966 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.3□□□□□ -1.88
AP1S1P61966 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms