Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN20P56880 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.02□□□□□ -1.77
CLDN20P56880 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.02□□□□□ -1.77
CLDN20P56880 ELOCP28-201ENST00000590044 317 ntBASIC4.02□□□□□ -1.77
CLDN20P56880 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.02□□□□□ -1.77
CLDN20P56880 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.02□□□□□ -1.77
CLDN20P56880 AC013444.2-201ENST00000603317 787 ntBASIC4.02□□□□□ -1.77
CLDN20P56880 AL356218.2-201ENST00000605264 187 ntBASIC4.02□□□□□ -1.77
CLDN20P56880 AC090948.1-201ENST00000607464 549 ntBASIC4.02□□□□□ -1.77
CLDN20P56880 VIS1.1-201ENST00000610517 203 ntBASIC4.02□□□□□ -1.77
CLDN20P56880 AL603755.1-201ENST00000619504 163 ntBASIC4.02□□□□□ -1.77
CLDN20P56880 AC120349.2-201ENST00000625002 298 ntBASIC4.02□□□□□ -1.77
CLDN20P56880 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN20P56880 AC006065.6-201ENST00000625201 545 ntBASIC4.02□□□□□ -1.77
CLDN20P56880 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN20P56880 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN20P56880 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.01□□□□□ -1.77
CLDN20P56880 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
CLDN20P56880 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CLDN20P56880 ZNF542P-204ENST00000482727 1305 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.01□□□□□ -1.77
CLDN20P56880 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.01□□□□□ -1.77
CLDN20P56880 RNU6-216P-201ENST00000363282 104 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CLDN20P56880 RNU6-921P-201ENST00000384361 107 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 RNU6-441P-201ENST00000384545 106 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 RNU4-72P-201ENST00000410754 173 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 RPS3AP9-201ENST00000417027 792 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 TIMM9P2-201ENST00000419324 266 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 AC098592.1-201ENST00000419352 333 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 AC011233.1-201ENST00000422812 283 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 AC073335.1-201ENST00000427776 363 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.01□□□□□ -1.77
CLDN20P56880 RPL36P19-201ENST00000430744 301 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 ELOCP8-201ENST00000439309 332 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 ELOCP15-201ENST00000442090 332 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 MTND2P22-201ENST00000444325 1033 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.01□□□□□ -1.77
CLDN20P56880 AL606662.1-201ENST00000445763 553 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 RSL24D1P3-201ENST00000449255 495 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.01□□□□□ -1.77
CLDN20P56880 RPL23AP24-201ENST00000458203 385 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.01□□□□□ -1.77
CLDN20P56880 AC053481.1-201ENST00000467217 306 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 AC013828.1-201ENST00000481845 158 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 LINC00888-204ENST00000487386 421 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 RPL7P38-201ENST00000488396 739 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.01□□□□□ -1.77
CLDN20P56880 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.01□□□□□ -1.77
CLDN20P56880 AC110792.2-201ENST00000510278 224 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLDN20P56880 AC010486.3-201ENST00000511602 785 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.01□□□□□ -1.77
CLDN20P56880 AC018797.3-201ENST00000513388 1241 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.01□□□□□ -1.77
CLDN20P56880 SNORD116-26-201ENST00000516006 96 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 SLC2A13P1-201ENST00000531560 322 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 UBE2NP1-201ENST00000545592 458 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.01□□□□□ -1.77
CLDN20P56880 AC109446.2-201ENST00000567872 497 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 MIR4999-201ENST00000585029 91 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 AC103881.1-201ENST00000603476 538 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.01□□□□□ -1.77
CLDN20P56880 AC106791.2-201ENST00000604680 391 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.01□□□□□ -1.77
CLDN20P56880 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CLDN20P56880 AC091905.2-201ENST00000623143 306 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 AP000676.3-201ENST00000623299 569 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 BMS1P21-201ENST00000634565 365 ntBASIC4.01□□□□□ -1.77
CLDN20P56880 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLDN20P56880 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLDN20P56880 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.01□□□□□ -1.77
CLDN20P56880 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.01□□□□□ -1.77
CLDN20P56880 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLDN20P56880 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.01□□□□□ -1.77
CLDN20P56880 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4□□□□□ -1.77
CLDN20P56880 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4□□□□□ -1.77
CLDN20P56880 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CLDN20P56880 AL390862.1-201ENST00000635467 1469 ntBASIC4□□□□□ -1.77
CLDN20P56880 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4□□□□□ -1.77
CLDN20P56880 SAGE2P-201ENST00000420011 2126 ntBASIC4□□□□□ -1.77
CLDN20P56880 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4□□□□□ -1.77
CLDN20P56880 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4□□□□□ -1.77
CLDN20P56880 AC008033.1-201ENST00000216407 1162 ntBASIC4□□□□□ -1.77
CLDN20P56880 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CLDN20P56880 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLDN20P56880 RNU1-15P-201ENST00000353977 144 ntBASIC4□□□□□ -1.77
CLDN20P56880 RNU1-85P-201ENST00000364127 164 ntBASIC4□□□□□ -1.77
CLDN20P56880 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4□□□□□ -1.77
CLDN20P56880 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
CLDN20P56880 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLDN20P56880 RNU1-63P-201ENST00000383902 164 ntBASIC4□□□□□ -1.77
CLDN20P56880 SNORD116-2-201ENST00000384274 95 ntBASIC4□□□□□ -1.77
CLDN20P56880 SNORD116-6-201ENST00000384711 96 ntBASIC4□□□□□ -1.77
CLDN20P56880 AL590084.2-201ENST00000401481 382 ntBASIC4□□□□□ -1.77
CLDN20P56880 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4□□□□□ -1.77
CLDN20P56880 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4□□□□□ -1.77
CLDN20P56880 AC062016.2-201ENST00000420950 676 ntBASIC4□□□□□ -1.77
CLDN20P56880 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4□□□□□ -1.77
CLDN20P56880 AL592293.2-201ENST00000422292 996 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms