Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.84□□□□□ -1.63
PER3P56645 RNU6-1178P-201ENST00000516674 107 ntBASIC4.84□□□□□ -1.63
PER3P56645 RAB9BP1-201ENST00000519581 626 ntBASIC4.84□□□□□ -1.63
PER3P56645 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.84□□□□□ -1.63
PER3P56645 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.84□□□□□ -1.63
PER3P56645 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.84□□□□□ -1.63
PER3P56645 AC122688.1-201ENST00000541494 223 ntBASIC4.84□□□□□ -1.63
PER3P56645 LSM6P2-201ENST00000552208 177 ntBASIC4.84□□□□□ -1.63
PER3P56645 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.84□□□□□ -1.63
PER3P56645 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.84□□□□□ -1.63
PER3P56645 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.84□□□□□ -1.63
PER3P56645 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.84□□□□□ -1.63
PER3P56645 MIR4504-201ENST00000577413 92 ntBASIC4.84□□□□□ -1.63
PER3P56645 MIR5186-201ENST00000577504 120 ntBASIC4.84□□□□□ -1.63
PER3P56645 RN7SL290P-201ENST00000578661 300 ntBASIC4.84□□□□□ -1.63
PER3P56645 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.84□□□□□ -1.63
PER3P56645 AL606834.2-201ENST00000602954 668 ntBASIC4.84□□□□□ -1.63
PER3P56645 AL161729.4-201ENST00000604650 476 ntBASIC4.84□□□□□ -1.63
PER3P56645 AL022154.1-201ENST00000604698 785 ntBASIC4.84□□□□□ -1.63
PER3P56645 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.84□□□□□ -1.63
PER3P56645 AC090948.2-201ENST00000607363 564 ntBASIC4.84□□□□□ -1.63
PER3P56645 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.84□□□□□ -1.63
PER3P56645 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.84□□□□□ -1.63
PER3P56645 AC090517.2-201ENST00000614966 680 ntBASIC4.84□□□□□ -1.63
PER3P56645 AC008250.2-201ENST00000615261 205 ntBASIC4.84□□□□□ -1.63
PER3P56645 AP001506.1-201ENST00000615444 211 ntBASIC4.84□□□□□ -1.63
PER3P56645 CYP4F35P-202ENST00000636121 390 ntBASIC4.84□□□□□ -1.63
PER3P56645 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PER3P56645 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PER3P56645 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PER3P56645 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PER3P56645 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.84□□□□□ -1.64
PER3P56645 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
PER3P56645 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PER3P56645 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
PER3P56645 AL031119.1-201ENST00000404707 1879 ntBASIC4.83□□□□□ -1.64
PER3P56645 AL445437.1-201ENST00000623157 3087 ntBASIC4.83□□□□□ -1.64
PER3P56645 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PER3P56645 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PER3P56645 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PER3P56645 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PER3P56645 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.83□□□□□ -1.64
PER3P56645 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
PER3P56645 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PER3P56645 OR11H5P-202ENST00000641612 1325 ntBASIC4.83□□□□□ -1.64
PER3P56645 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PER3P56645 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PER3P56645 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.83□□□□□ -1.64
PER3P56645 RNU6-1226P-201ENST00000384317 107 ntBASIC4.83□□□□□ -1.64
PER3P56645 MIR192-201ENST00000384915 110 ntBASIC4.83□□□□□ -1.64
PER3P56645 MIR105-1-201ENST00000385222 81 ntBASIC4.83□□□□□ -1.64
PER3P56645 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PER3P56645 AL359643.1-201ENST00000404109 423 ntBASIC4.83□□□□□ -1.64
PER3P56645 Y_RNA.608-201ENST00000410647 95 ntBASIC4.83□□□□□ -1.64
PER3P56645 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.83□□□□□ -1.64
PER3P56645 COX5BP7-201ENST00000414780 274 ntBASIC4.83□□□□□ -1.64
PER3P56645 RIMKLBP2-201ENST00000424737 654 ntBASIC4.83□□□□□ -1.64
PER3P56645 AL360081.1-201ENST00000428299 555 ntBASIC4.83□□□□□ -1.64
PER3P56645 USP9YP9-201ENST00000429406 715 ntBASIC4.83□□□□□ -1.64
PER3P56645 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.83□□□□□ -1.64
PER3P56645 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.83□□□□□ -1.64
PER3P56645 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.83□□□□□ -1.64
PER3P56645 AL589765.3-201ENST00000446084 462 ntBASIC4.83□□□□□ -1.64
PER3P56645 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.83□□□□□ -1.64
PER3P56645 AC239809.1-201ENST00000450470 217 ntBASIC4.83□□□□□ -1.64
PER3P56645 AC104073.1-201ENST00000451988 151 ntBASIC4.83□□□□□ -1.64
PER3P56645 USP9YP34-201ENST00000453983 808 ntBASIC4.83□□□□□ -1.64
PER3P56645 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PER3P56645 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.83□□□□□ -1.64
PER3P56645 AC016559.2-201ENST00000510759 359 ntBASIC4.83□□□□□ -1.64
PER3P56645 AC004980.4-201ENST00000513375 203 ntBASIC4.83□□□□□ -1.64
PER3P56645 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.83□□□□□ -1.64
PER3P56645 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.83□□□□□ -1.64
PER3P56645 AL671862.1-201ENST00000515851 349 ntBASIC4.83□□□□□ -1.64
PER3P56645 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.83□□□□□ -1.64
PER3P56645 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.83□□□□□ -1.64
PER3P56645 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.83□□□□□ -1.64
PER3P56645 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.83□□□□□ -1.64
PER3P56645 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.83□□□□□ -1.64
PER3P56645 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.83□□□□□ -1.64
PER3P56645 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.83□□□□□ -1.64
PER3P56645 RPL10P14-201ENST00000565265 298 ntBASIC4.83□□□□□ -1.64
PER3P56645 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.83□□□□□ -1.64
PER3P56645 AC090312.1-201ENST00000580637 348 ntBASIC4.83□□□□□ -1.64
PER3P56645 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.83□□□□□ -1.64
PER3P56645 AC009597.2-201ENST00000604659 592 ntBASIC4.83□□□□□ -1.64
PER3P56645 COX6CP4-201ENST00000605798 228 ntBASIC4.83□□□□□ -1.64
PER3P56645 U4.5-201ENST00000617137 123 ntBASIC4.83□□□□□ -1.64
PER3P56645 AC108479.2-201ENST00000617314 601 ntBASIC4.83□□□□□ -1.64
PER3P56645 AC009237.17-201ENST00000618111 748 ntBASIC4.83□□□□□ -1.64
PER3P56645 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.83□□□□□ -1.64
PER3P56645 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PER3P56645 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.83□□□□□ -1.64
PER3P56645 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PER3P56645 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.83□□□□□ -1.64
PER3P56645 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PER3P56645 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.83□□□□□ -1.64
PER3P56645 AC097504.1-201ENST00000515103 2415 ntBASIC4.83□□□□□ -1.64
PER3P56645 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
PER3P56645 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms