Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.8□□□□□ -1.64
COPAP53621 RGS17P1-201ENST00000423358 553 ntBASIC4.8□□□□□ -1.64
COPAP53621 AC019178.2-201ENST00000423595 505 ntBASIC4.8□□□□□ -1.64
COPAP53621 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.8□□□□□ -1.64
COPAP53621 AC098826.1-201ENST00000433943 471 ntBASIC4.8□□□□□ -1.64
COPAP53621 USP9YP35-201ENST00000435696 412 ntBASIC4.8□□□□□ -1.64
COPAP53621 THAP5P1-201ENST00000439089 262 ntBASIC4.8□□□□□ -1.64
COPAP53621 RPS26P56-201ENST00000444468 240 ntBASIC4.8□□□□□ -1.64
COPAP53621 MTCO2P7-201ENST00000446518 666 ntBASIC4.8□□□□□ -1.64
COPAP53621 MTCO1P48-201ENST00000448024 1096 ntBASIC4.8□□□□□ -1.64
COPAP53621 TPT1P12-201ENST00000448968 492 ntBASIC4.8□□□□□ -1.64
COPAP53621 SLC31A1P1-201ENST00000451221 567 ntBASIC4.8□□□□□ -1.64
COPAP53621 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.8□□□□□ -1.64
COPAP53621 AC073387.1-201ENST00000453261 709 ntBASIC4.8□□□□□ -1.64
COPAP53621 DDX39BP2-208ENST00000453923 258 ntBASIC4.8□□□□□ -1.64
COPAP53621 RPL7P1-201ENST00000468161 747 ntBASIC4.8□□□□□ -1.64
COPAP53621 MTND4LP3-201ENST00000468320 276 ntBASIC4.8□□□□□ -1.64
COPAP53621 RPL7P9-201ENST00000468715 747 ntBASIC4.8□□□□□ -1.64
COPAP53621 RN7SL385P-201ENST00000468873 276 ntBASIC4.8□□□□□ -1.64
COPAP53621 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.8□□□□□ -1.64
COPAP53621 DEFB109F-201ENST00000491870 277 ntBASIC4.8□□□□□ -1.64
COPAP53621 AC092045.1-201ENST00000495716 1231 ntBASIC4.8□□□□□ -1.64
COPAP53621 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.8□□□□□ -1.64
COPAP53621 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.8□□□□□ -1.64
COPAP53621 HSPE1P23-201ENST00000509838 286 ntBASIC4.8□□□□□ -1.64
COPAP53621 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.8□□□□□ -1.64
COPAP53621 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPAP53621 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.8□□□□□ -1.64
COPAP53621 RNU6-709P-201ENST00000517257 104 ntBASIC4.8□□□□□ -1.64
COPAP53621 AP000790.1-201ENST00000528891 737 ntBASIC4.8□□□□□ -1.64
COPAP53621 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.8□□□□□ -1.64
COPAP53621 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.8□□□□□ -1.64
COPAP53621 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.8□□□□□ -1.64
COPAP53621 AGGF1P8-201ENST00000562979 1000 ntBASIC4.8□□□□□ -1.64
COPAP53621 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.8□□□□□ -1.64
COPAP53621 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPAP53621 AP000811.1-201ENST00000603803 651 ntBASIC4.8□□□□□ -1.64
COPAP53621 AC135507.1-201ENST00000607214 561 ntBASIC4.8□□□□□ -1.64
COPAP53621 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.8□□□□□ -1.64
COPAP53621 AC122108.2-201ENST00000611946 526 ntBASIC4.8□□□□□ -1.64
COPAP53621 AC067931.1-201ENST00000624190 671 ntBASIC4.8□□□□□ -1.64
COPAP53621 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COPAP53621 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPAP53621 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.8□□□□□ -1.64
COPAP53621 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COPAP53621 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COPAP53621 AC026951.1-201ENST00000559530 2459 ntBASIC4.8□□□□□ -1.64
COPAP53621 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
COPAP53621 MTND4P34-201ENST00000572715 1371 ntBASIC4.79□□□□□ -1.64
COPAP53621 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COPAP53621 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
COPAP53621 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
COPAP53621 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COPAP53621 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COPAP53621 AC068538.1-201ENST00000376856 336 ntBASIC4.79□□□□□ -1.64
COPAP53621 Y_RNA.560-201ENST00000384689 102 ntBASIC4.79□□□□□ -1.64
COPAP53621 RNU1-82P-201ENST00000390851 165 ntBASIC4.79□□□□□ -1.64
COPAP53621 U3.22-201ENST00000391120 215 ntBASIC4.79□□□□□ -1.64
COPAP53621 AL450338.1-201ENST00000407987 512 ntBASIC4.79□□□□□ -1.64
COPAP53621 ELOCP19-201ENST00000411919 318 ntBASIC4.79□□□□□ -1.64
COPAP53621 CEACAMP8-201ENST00000413902 580 ntBASIC4.79□□□□□ -1.64
COPAP53621 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.79□□□□□ -1.64
COPAP53621 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.79□□□□□ -1.64
COPAP53621 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.79□□□□□ -1.64
COPAP53621 SDCBPP2-201ENST00000424643 885 ntBASIC4.79□□□□□ -1.64
COPAP53621 AL035407.1-201ENST00000429211 571 ntBASIC4.79□□□□□ -1.64
COPAP53621 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.79□□□□□ -1.64
COPAP53621 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.79□□□□□ -1.64
COPAP53621 MTND2P20-201ENST00000440805 661 ntBASIC4.79□□□□□ -1.64
COPAP53621 ARL2BPP10-201ENST00000446487 531 ntBASIC4.79□□□□□ -1.64
COPAP53621 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.79□□□□□ -1.64
COPAP53621 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.79□□□□□ -1.64
COPAP53621 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.79□□□□□ -1.64
COPAP53621 AC026979.1-201ENST00000492525 396 ntBASIC4.79□□□□□ -1.64
COPAP53621 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.79□□□□□ -1.64
COPAP53621 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.79□□□□□ -1.64
COPAP53621 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
COPAP53621 AC110792.2-201ENST00000510278 224 ntBASIC4.79□□□□□ -1.64
COPAP53621 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
COPAP53621 AC018797.3-201ENST00000513388 1241 ntBASIC4.79□□□□□ -1.64
COPAP53621 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COPAP53621 AC009643.1-201ENST00000532030 391 ntBASIC4.79□□□□□ -1.64
COPAP53621 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.79□□□□□ -1.64
COPAP53621 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.79□□□□□ -1.64
COPAP53621 AC074029.1-201ENST00000552531 1044 ntBASIC4.79□□□□□ -1.64
COPAP53621 AC093249.4-201ENST00000564755 259 ntBASIC4.79□□□□□ -1.64
COPAP53621 AC107982.3-201ENST00000584957 985 ntBASIC4.79□□□□□ -1.64
COPAP53621 AC146944.4-201ENST00000602697 718 ntBASIC4.79□□□□□ -1.64
COPAP53621 AC083899.3-201ENST00000603413 594 ntBASIC4.79□□□□□ -1.64
COPAP53621 AC069304.2-201ENST00000605154 435 ntBASIC4.79□□□□□ -1.64
COPAP53621 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.79□□□□□ -1.64
COPAP53621 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COPAP53621 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
COPAP53621 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
COPAP53621 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
COPAP53621 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
COPAP53621 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
COPAP53621 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
COPAP53621 AC139713.2-214ENST00000642059 1811 ntBASIC4.79□□□□□ -1.64
COPAP53621 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms