Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.52□□□□□ -1.53
MRE11P49959 RNU1-149P-201ENST00000390870 161 ntBASIC5.52□□□□□ -1.53
MRE11P49959 RNA5SP332-201ENST00000391063 115 ntBASIC5.52□□□□□ -1.53
MRE11P49959 NCSTNP1-201ENST00000406229 144 ntBASIC5.52□□□□□ -1.53
MRE11P49959 RNA5SP44-201ENST00000410446 133 ntBASIC5.52□□□□□ -1.53
MRE11P49959 RNU2-66P-201ENST00000410650 161 ntBASIC5.52□□□□□ -1.53
MRE11P49959 OR8G2P-201ENST00000412796 908 ntBASIC5.52□□□□□ -1.53
MRE11P49959 MTND1P21-201ENST00000412991 285 ntBASIC5.52□□□□□ -1.53
MRE11P49959 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.52□□□□□ -1.53
MRE11P49959 AC069213.2-201ENST00000420238 366 ntBASIC5.52□□□□□ -1.53
MRE11P49959 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.52□□□□□ -1.53
MRE11P49959 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.52□□□□□ -1.53
MRE11P49959 EIF1P1-201ENST00000421436 341 ntBASIC5.52□□□□□ -1.53
MRE11P49959 CHIAP3-201ENST00000423668 1133 ntBASIC5.52□□□□□ -1.53
MRE11P49959 EI24P4-201ENST00000423683 1078 ntBASIC5.52□□□□□ -1.53
MRE11P49959 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.52□□□□□ -1.53
MRE11P49959 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.52□□□□□ -1.53
MRE11P49959 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.52□□□□□ -1.53
MRE11P49959 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.52□□□□□ -1.53
MRE11P49959 FHP1-201ENST00000442741 703 ntBASIC5.52□□□□□ -1.53
MRE11P49959 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.52□□□□□ -1.53
MRE11P49959 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
MRE11P49959 AC021205.1-201ENST00000468797 348 ntBASIC5.52□□□□□ -1.53
MRE11P49959 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.52□□□□□ -1.53
MRE11P49959 ACTG1P13-201ENST00000486987 1043 ntBASIC5.52□□□□□ -1.53
MRE11P49959 AC104685.1-201ENST00000502445 371 ntBASIC5.52□□□□□ -1.53
MRE11P49959 AC025445.1-201ENST00000502728 300 ntBASIC5.52□□□□□ -1.53
MRE11P49959 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.52□□□□□ -1.53
MRE11P49959 MTND2P33-201ENST00000506452 1031 ntBASIC5.52□□□□□ -1.53
MRE11P49959 RPL37P25-201ENST00000507308 276 ntBASIC5.52□□□□□ -1.53
MRE11P49959 ATP1B1P1-201ENST00000509767 915 ntBASIC5.52□□□□□ -1.53
MRE11P49959 FABP5P5-201ENST00000515537 406 ntBASIC5.52□□□□□ -1.53
MRE11P49959 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.52□□□□□ -1.53
MRE11P49959 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.52□□□□□ -1.53
MRE11P49959 HMGB1P40-201ENST00000525121 540 ntBASIC5.52□□□□□ -1.53
MRE11P49959 CBX3P7-201ENST00000532876 502 ntBASIC5.52□□□□□ -1.53
MRE11P49959 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.52□□□□□ -1.53
MRE11P49959 AC008033.2-201ENST00000542626 177 ntBASIC5.52□□□□□ -1.53
MRE11P49959 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.52□□□□□ -1.53
MRE11P49959 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.52□□□□□ -1.53
MRE11P49959 MTCO3P24-201ENST00000572729 782 ntBASIC5.52□□□□□ -1.53
MRE11P49959 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.52□□□□□ -1.53
MRE11P49959 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.52□□□□□ -1.53
MRE11P49959 AC008638.3-201ENST00000603341 463 ntBASIC5.52□□□□□ -1.53
MRE11P49959 AL139395.1-201ENST00000603662 160 ntBASIC5.52□□□□□ -1.53
MRE11P49959 AC091805.2-201ENST00000603848 235 ntBASIC5.52□□□□□ -1.53
MRE11P49959 AC112220.3-201ENST00000605502 502 ntBASIC5.52□□□□□ -1.53
MRE11P49959 AC069234.5-201ENST00000611056 416 ntBASIC5.52□□□□□ -1.53
MRE11P49959 AC024941.1-201ENST00000612250 334 ntBASIC5.52□□□□□ -1.53
MRE11P49959 AC013476.2-201ENST00000614456 459 ntBASIC5.52□□□□□ -1.53
MRE11P49959 AC026368.1-201ENST00000614934 690 ntBASIC5.52□□□□□ -1.53
MRE11P49959 MLECP1-201ENST00000615893 709 ntBASIC5.52□□□□□ -1.53
MRE11P49959 MIR7844-201ENST00000616161 122 ntBASIC5.52□□□□□ -1.53
MRE11P49959 LINC00901.1-201ENST00000617252 152 ntBASIC5.52□□□□□ -1.53
MRE11P49959 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
MRE11P49959 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
MRE11P49959 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.52□□□□□ -1.53
MRE11P49959 AC007529.1-201ENST00000418574 2178 ntBASIC5.52□□□□□ -1.53
MRE11P49959 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.52□□□□□ -1.53
MRE11P49959 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
MRE11P49959 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MRE11P49959 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
MRE11P49959 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MRE11P49959 HMGB1P5-201ENST00000255320 642 ntBASIC5.51□□□□□ -1.53
MRE11P49959 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
MRE11P49959 Y_RNA.18-201ENST00000362461 102 ntBASIC5.51□□□□□ -1.53
MRE11P49959 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.51□□□□□ -1.53
MRE11P49959 RHOT1P2-201ENST00000366423 333 ntBASIC5.51□□□□□ -1.53
MRE11P49959 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MRE11P49959 RNA5SP104-201ENST00000410989 118 ntBASIC5.51□□□□□ -1.53
MRE11P49959 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.51□□□□□ -1.53
MRE11P49959 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.51□□□□□ -1.53
MRE11P49959 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.51□□□□□ -1.53
MRE11P49959 RPS27AP7-201ENST00000422792 455 ntBASIC5.51□□□□□ -1.53
MRE11P49959 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.51□□□□□ -1.53
MRE11P49959 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MRE11P49959 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.51□□□□□ -1.53
MRE11P49959 SEPT7P5-201ENST00000434048 306 ntBASIC5.51□□□□□ -1.53
MRE11P49959 AC093155.1-201ENST00000440164 826 ntBASIC5.51□□□□□ -1.53
MRE11P49959 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.51□□□□□ -1.53
MRE11P49959 VPS26AP1-201ENST00000483197 979 ntBASIC5.51□□□□□ -1.53
MRE11P49959 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.51□□□□□ -1.53
MRE11P49959 BNIP3P41-201ENST00000503774 571 ntBASIC5.51□□□□□ -1.53
MRE11P49959 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.51□□□□□ -1.53
MRE11P49959 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MRE11P49959 RNU6-1225P-201ENST00000516336 65 ntBASIC5.51□□□□□ -1.53
MRE11P49959 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.51□□□□□ -1.53
MRE11P49959 AP001207.1-201ENST00000524051 481 ntBASIC5.51□□□□□ -1.53
MRE11P49959 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
MRE11P49959 OR6C7P-201ENST00000547875 934 ntBASIC5.51□□□□□ -1.53
MRE11P49959 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.51□□□□□ -1.53
MRE11P49959 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.51□□□□□ -1.53
MRE11P49959 MIR4277-201ENST00000578298 84 ntBASIC5.51□□□□□ -1.53
MRE11P49959 EIF1P6-201ENST00000600054 334 ntBASIC5.51□□□□□ -1.53
MRE11P49959 AL606834.2-201ENST00000602954 668 ntBASIC5.51□□□□□ -1.53
MRE11P49959 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.51□□□□□ -1.53
MRE11P49959 AC090527.3-201ENST00000619041 548 ntBASIC5.51□□□□□ -1.53
MRE11P49959 AL008636.1-201ENST00000625038 1018 ntBASIC5.51□□□□□ -1.53
MRE11P49959 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MRE11P49959 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms