Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HTTP42858 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HTTP42858 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HTTP42858 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HTTP42858 RPL9P32-201ENST00000464118 620 ntBASIC3.18□□□□□ -1.9
HTTP42858 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.18□□□□□ -1.9
HTTP42858 AC025445.1-201ENST00000502728 300 ntBASIC3.18□□□□□ -1.9
HTTP42858 RN7SKP283-201ENST00000517197 270 ntBASIC3.18□□□□□ -1.9
HTTP42858 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.18□□□□□ -1.9
HTTP42858 AL442163.2-201ENST00000553912 710 ntBASIC3.18□□□□□ -1.9
HTTP42858 FAM35BP-202ENST00000497389 3337 ntBASIC3.18□□□□□ -1.9
HTTP42858 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HTTP42858 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.18□□□□□ -1.9
HTTP42858 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
HTTP42858 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HTTP42858 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HTTP42858 RANP4-201ENST00000413361 655 ntBASIC3.18□□□□□ -1.9
HTTP42858 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.18□□□□□ -1.9
HTTP42858 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.18□□□□□ -1.9
HTTP42858 RNA5SP282-201ENST00000516355 108 ntBASIC3.18□□□□□ -1.9
HTTP42858 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.18□□□□□ -1.9
HTTP42858 AC093524.1-201ENST00000564266 1094 ntBASIC3.18□□□□□ -1.9
HTTP42858 AC009163.5-201ENST00000575421 637 ntBASIC3.18□□□□□ -1.9
HTTP42858 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.18□□□□□ -1.9
HTTP42858 HSPA8P1-201ENST00000425843 1833 ntBASIC3.18□□□□□ -1.9
HTTP42858 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.18□□□□□ -1.9
HTTP42858 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
HTTP42858 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.18□□□□□ -1.9
HTTP42858 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HTTP42858 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HTTP42858 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.17□□□□□ -1.9
HTTP42858 HMGN2P3-201ENST00000433603 273 ntBASIC3.17□□□□□ -1.9
HTTP42858 HMGN2P5-201ENST00000436882 273 ntBASIC3.17□□□□□ -1.9
HTTP42858 AL162389.1-201ENST00000449233 177 ntBASIC3.17□□□□□ -1.9
HTTP42858 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.17□□□□□ -1.9
HTTP42858 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
HTTP42858 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.17□□□□□ -1.9
HTTP42858 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
HTTP42858 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.17□□□□□ -1.9
HTTP42858 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.17□□□□□ -1.9
HTTP42858 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC3.17□□□□□ -1.9
HTTP42858 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
HTTP42858 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HTTP42858 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC3.17□□□□□ -1.9
HTTP42858 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC3.17□□□□□ -1.9
HTTP42858 MRPS31P2-201ENST00000451581 518 ntBASIC3.17□□□□□ -1.9
HTTP42858 AC008280.2-201ENST00000455473 307 ntBASIC3.17□□□□□ -1.9
HTTP42858 RPS27AP9-201ENST00000477681 438 ntBASIC3.17□□□□□ -1.9
HTTP42858 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.17□□□□□ -1.9
HTTP42858 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
HTTP42858 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.17□□□□□ -1.9
HTTP42858 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HTTP42858 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.17□□□□□ -1.9
HTTP42858 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HTTP42858 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HTTP42858 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HTTP42858 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
HTTP42858 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.17□□□□□ -1.9
HTTP42858 AP001025.2-201ENST00000490908 477 ntBASIC3.17□□□□□ -1.9
HTTP42858 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC3.17□□□□□ -1.9
HTTP42858 AC026634.1-201ENST00000634369 198 ntBASIC3.17□□□□□ -1.9
HTTP42858 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HTTP42858 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.17□□□□□ -1.9
HTTP42858 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
HTTP42858 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC3.16□□□□□ -1.9
HTTP42858 AP000641.1-201ENST00000531988 1639 ntBASIC3.16□□□□□ -1.9
HTTP42858 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
HTTP42858 RNVU1-3-201ENST00000364313 161 ntBASIC3.16□□□□□ -1.9
HTTP42858 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.16□□□□□ -1.9
HTTP42858 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.16□□□□□ -1.9
HTTP42858 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.16□□□□□ -1.9
HTTP42858 CKS1BP2-201ENST00000497342 240 ntBASIC3.16□□□□□ -1.9
HTTP42858 RN7SKP272-201ENST00000516988 232 ntBASIC3.16□□□□□ -1.9
HTTP42858 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.16□□□□□ -1.9
HTTP42858 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.16□□□□□ -1.9
HTTP42858 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
HTTP42858 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
HTTP42858 AC006020.1-201ENST00000420179 1854 ntBASIC3.16□□□□□ -1.9
HTTP42858 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
HTTP42858 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HTTP42858 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.16□□□□□ -1.9
HTTP42858 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.16□□□□□ -1.9
HTTP42858 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.16□□□□□ -1.9
HTTP42858 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.16□□□□□ -1.9
HTTP42858 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HTTP42858 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HTTP42858 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC3.16□□□□□ -1.9
HTTP42858 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HTTP42858 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
HTTP42858 RPL7P26-201ENST00000333817 754 ntBASIC3.15□□□□□ -1.9
HTTP42858 Y_RNA.4-201ENST00000362333 112 ntBASIC3.15□□□□□ -1.9
HTTP42858 NANOGP6-201ENST00000429190 847 ntBASIC3.15□□□□□ -1.9
HTTP42858 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.15□□□□□ -1.9
HTTP42858 RNU6-548P-201ENST00000517083 115 ntBASIC3.15□□□□□ -1.9
HTTP42858 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
HTTP42858 AL358913.1-201ENST00000554342 121 ntBASIC3.15□□□□□ -1.9
HTTP42858 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.15□□□□□ -1.9
HTTP42858 AC079228.1-201ENST00000624774 1049 ntBASIC3.15□□□□□ -1.9
HTTP42858 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.15□□□□□ -1.9
HTTP42858 AC018555.1-201ENST00000567548 1980 ntBASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms