Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 LLPHP1-201ENST00000603571 367 ntBASIC3.85□□□□□ -1.79
TRIM23P36406 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM23P36406 AC113194.1-201ENST00000606037 500 ntBASIC3.85□□□□□ -1.79
TRIM23P36406 AC105429.2-201ENST00000610567 517 ntBASIC3.85□□□□□ -1.79
TRIM23P36406 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM23P36406 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM23P36406 U7.8-201ENST00000619968 63 ntBASIC3.85□□□□□ -1.79
TRIM23P36406 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM23P36406 AL356863.1-201ENST00000623378 1080 ntBASIC3.85□□□□□ -1.79
TRIM23P36406 AC073530.2-201ENST00000623987 261 ntBASIC3.85□□□□□ -1.79
TRIM23P36406 AC103798.2-201ENST00000624292 632 ntBASIC3.85□□□□□ -1.79
TRIM23P36406 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM23P36406 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM23P36406 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM23P36406 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM23P36406 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM23P36406 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM23P36406 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM23P36406 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM23P36406 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
TRIM23P36406 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM23P36406 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM23P36406 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM23P36406 AC234772.1-201ENST00000377927 937 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 MIR554-201ENST00000384874 96 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 SNORD65C-201ENST00000390962 71 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 RN7SKP156-201ENST00000410308 342 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 AC069218.2-201ENST00000411665 344 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 AC007390.1-201ENST00000415722 356 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM23P36406 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM23P36406 AC013262.1-201ENST00000426710 252 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM23P36406 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.84□□□□□ -1.79
TRIM23P36406 RPS7P2-201ENST00000435134 607 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM23P36406 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
TRIM23P36406 AL050341.1-201ENST00000447743 313 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM23P36406 BX248409.1-201ENST00000455497 255 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 SNORA84-201ENST00000459229 133 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 RPL37P6-202ENST00000464216 403 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 RPL21P103-201ENST00000479921 488 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 RPL31P61-201ENST00000496160 376 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 AC026414.1-201ENST00000504046 698 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.84□□□□□ -1.79
TRIM23P36406 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM23P36406 SCARNA14-201ENST00000516903 136 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 RN7SKP234-201ENST00000517173 224 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM23P36406 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM23P36406 HIGD1AP10-201ENST00000527837 282 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 OR4A12P-201ENST00000530847 918 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.84□□□□□ -1.79
TRIM23P36406 AC087894.1-201ENST00000538359 518 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM23P36406 GNRHR2P1-201ENST00000555315 631 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 AC006270.2-201ENST00000578523 652 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM23P36406 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM23P36406 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM23P36406 AC245389.1-201ENST00000605141 529 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM23P36406 AC007275.1-201ENST00000621243 671 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM23P36406 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM23P36406 RPS4XP5-202ENST00000449995 1334 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 AP001148.1-201ENST00000624124 2359 ntBASIC3.84□□□□□ -1.79
TRIM23P36406 TNPO1P3-201ENST00000436471 2662 ntBASIC3.84□□□□□ -1.8
TRIM23P36406 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TRIM23P36406 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
TRIM23P36406 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM23P36406 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM23P36406 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM23P36406 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM23P36406 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM23P36406 AC093908.1-201ENST00000623125 8092 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM23P36406 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM23P36406 RNU6-1293P-201ENST00000384077 107 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 RNU6-549P-201ENST00000384433 107 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 RNU1-89P-201ENST00000384592 164 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 MIR153-1-201ENST00000384914 90 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 RNU6ATAC-201ENST00000408749 126 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 RNU2-37P-201ENST00000410695 177 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM23P36406 AL024507.1-201ENST00000412741 274 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM23P36406 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM23P36406 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM23P36406 AL445584.1-201ENST00000431451 330 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 KCTD9P3-201ENST00000434597 1169 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM23P36406 VN1R25P-201ENST00000443385 738 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 NOTCH2P1-201ENST00000443481 624 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 RANP8-201ENST00000444720 713 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 Z95327.1-201ENST00000446082 482 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 SEPT14P24-201ENST00000447236 180 ntBASIC3.83□□□□□ -1.8
TRIM23P36406 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms