Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RPS15AP40-201ENST00000419621 391 ntBASIC3.56□□□□□ -1.84
RORAP35398 AC006946.1-201ENST00000429106 328 ntBASIC3.56□□□□□ -1.84
RORAP35398 YME1L1P1-201ENST00000429435 297 ntBASIC3.56□□□□□ -1.84
RORAP35398 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.56□□□□□ -1.84
RORAP35398 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.56□□□□□ -1.84
RORAP35398 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.56□□□□□ -1.84
RORAP35398 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.56□□□□□ -1.84
RORAP35398 AC069540.1-201ENST00000446320 988 ntBASIC3.56□□□□□ -1.84
RORAP35398 PDSS1P2-201ENST00000449397 678 ntBASIC3.56□□□□□ -1.84
RORAP35398 RPL23AP23-201ENST00000452590 471 ntBASIC3.56□□□□□ -1.84
RORAP35398 AC098824.1-201ENST00000453565 980 ntBASIC3.56□□□□□ -1.84
RORAP35398 AC089999.1-201ENST00000460336 374 ntBASIC3.56□□□□□ -1.84
RORAP35398 RN7SL93P-201ENST00000463035 293 ntBASIC3.56□□□□□ -1.84
RORAP35398 AL049830.2-201ENST00000480072 201 ntBASIC3.56□□□□□ -1.84
RORAP35398 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.56□□□□□ -1.84
RORAP35398 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.56□□□□□ -1.84
RORAP35398 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.56□□□□□ -1.84
RORAP35398 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.56□□□□□ -1.84
RORAP35398 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.56□□□□□ -1.84
RORAP35398 AL390816.3-201ENST00000604527 1066 ntBASIC3.56□□□□□ -1.84
RORAP35398 AL137849.1-201ENST00000604767 169 ntBASIC3.56□□□□□ -1.84
RORAP35398 AC079610.2-201ENST00000604818 690 ntBASIC3.56□□□□□ -1.84
RORAP35398 AC006946.3-201ENST00000609791 756 ntBASIC3.56□□□□□ -1.84
RORAP35398 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.56□□□□□ -1.84
RORAP35398 AC079684.1-201ENST00000621405 437 ntBASIC3.56□□□□□ -1.84
RORAP35398 FAM157B-203ENST00000639350 358 ntBASIC3.56□□□□□ -1.84
RORAP35398 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RORAP35398 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RORAP35398 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RORAP35398 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RORAP35398 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RORAP35398 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RORAP35398 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.55□□□□□ -1.84
RORAP35398 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RORAP35398 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.55□□□□□ -1.84
RORAP35398 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RORAP35398 HSPA8P19-201ENST00000505359 1517 ntBASIC3.55□□□□□ -1.84
RORAP35398 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.55□□□□□ -1.84
RORAP35398 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RORAP35398 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RORAP35398 SNORA63.1-201ENST00000362493 131 ntBASIC3.55□□□□□ -1.84
RORAP35398 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RORAP35398 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RORAP35398 RPL7P60-201ENST00000397636 735 ntBASIC3.55□□□□□ -1.84
RORAP35398 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RORAP35398 UBE2V1P15-201ENST00000407776 448 ntBASIC3.55□□□□□ -1.84
RORAP35398 RPL30P2-201ENST00000414021 291 ntBASIC3.55□□□□□ -1.84
RORAP35398 VTA1P1-201ENST00000414044 866 ntBASIC3.55□□□□□ -1.84
RORAP35398 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.55□□□□□ -1.84
RORAP35398 EI24P1-201ENST00000416584 867 ntBASIC3.55□□□□□ -1.84
RORAP35398 AC127526.1-201ENST00000417526 366 ntBASIC3.55□□□□□ -1.84
RORAP35398 MTND2P16-201ENST00000419987 799 ntBASIC3.55□□□□□ -1.84
RORAP35398 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.55□□□□□ -1.84
RORAP35398 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.55□□□□□ -1.84
RORAP35398 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.55□□□□□ -1.84
RORAP35398 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.55□□□□□ -1.84
RORAP35398 FAR1P1-201ENST00000427163 934 ntBASIC3.55□□□□□ -1.84
RORAP35398 IFNNP1-201ENST00000429219 553 ntBASIC3.55□□□□□ -1.84
RORAP35398 RPL21P112-201ENST00000434403 463 ntBASIC3.55□□□□□ -1.84
RORAP35398 SNORA71B-202ENST00000439232 272 ntBASIC3.55□□□□□ -1.84
RORAP35398 AL513321.1-201ENST00000441175 761 ntBASIC3.55□□□□□ -1.84
RORAP35398 AC092685.1-201ENST00000447960 1243 ntBASIC3.55□□□□□ -1.84
RORAP35398 AC006480.1-201ENST00000449887 378 ntBASIC3.55□□□□□ -1.84
RORAP35398 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.55□□□□□ -1.84
RORAP35398 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.55□□□□□ -1.84
RORAP35398 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.55□□□□□ -1.84
RORAP35398 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.55□□□□□ -1.84
RORAP35398 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.55□□□□□ -1.84
RORAP35398 RN7SKP277-201ENST00000516895 283 ntBASIC3.55□□□□□ -1.84
RORAP35398 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.55□□□□□ -1.84
RORAP35398 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.55□□□□□ -1.84
RORAP35398 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.55□□□□□ -1.84
RORAP35398 IGKV2D-19-201ENST00000523346 262 ntBASIC3.55□□□□□ -1.84
RORAP35398 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.55□□□□□ -1.84
RORAP35398 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.55□□□□□ -1.84
RORAP35398 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.55□□□□□ -1.84
RORAP35398 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.55□□□□□ -1.84
RORAP35398 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.55□□□□□ -1.84
RORAP35398 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.55□□□□□ -1.84
RORAP35398 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
RORAP35398 AC069200.1-201ENST00000609511 323 ntBASIC3.55□□□□□ -1.84
RORAP35398 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
RORAP35398 MIR8058-201ENST00000615737 89 ntBASIC3.55□□□□□ -1.84
RORAP35398 AC244100.1-202ENST00000621554 382 ntBASIC3.55□□□□□ -1.84
RORAP35398 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.55□□□□□ -1.84
RORAP35398 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
RORAP35398 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RORAP35398 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RORAP35398 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RORAP35398 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RORAP35398 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.54□□□□□ -1.84
RORAP35398 LINC00561-201ENST00000565815 2738 ntBASIC3.54□□□□□ -1.84
RORAP35398 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
RORAP35398 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RORAP35398 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
RORAP35398 MIR208A-201ENST00000362287 71 ntBASIC3.54□□□□□ -1.84
RORAP35398 SNORA70.4-201ENST00000365509 134 ntBASIC3.54□□□□□ -1.84
RORAP35398 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RORAP35398 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.54□□□□□ -1.84
RORAP35398 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms