Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.34□□□□□ -1.71
USP6P35125 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.34□□□□□ -1.71
USP6P35125 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.34□□□□□ -1.71
USP6P35125 IGHV3-29-201ENST00000604817 344 ntBASIC4.34□□□□□ -1.71
USP6P35125 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.34□□□□□ -1.71
USP6P35125 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.34□□□□□ -1.71
USP6P35125 AL137790.1-201ENST00000634283 177 ntBASIC4.34□□□□□ -1.71
USP6P35125 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
USP6P35125 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
USP6P35125 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
USP6P35125 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
USP6P35125 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP6P35125 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.33□□□□□ -1.72
USP6P35125 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP6P35125 AC104297.1-201ENST00000393779 870 ntBASIC4.33□□□□□ -1.72
USP6P35125 ZNF603P-201ENST00000405613 487 ntBASIC4.33□□□□□ -1.72
USP6P35125 RNA5SP80-201ENST00000410475 111 ntBASIC4.33□□□□□ -1.72
USP6P35125 SNORA79B-201ENST00000410557 148 ntBASIC4.33□□□□□ -1.72
USP6P35125 AL513174.1-201ENST00000423182 629 ntBASIC4.33□□□□□ -1.72
USP6P35125 MTND4LP13-201ENST00000425022 298 ntBASIC4.33□□□□□ -1.72
USP6P35125 RPL35AP12-201ENST00000425362 338 ntBASIC4.33□□□□□ -1.72
USP6P35125 ETF1P3-201ENST00000430422 1160 ntBASIC4.33□□□□□ -1.72
USP6P35125 FTLP19-201ENST00000433300 394 ntBASIC4.33□□□□□ -1.72
USP6P35125 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.33□□□□□ -1.72
USP6P35125 AC069540.1-201ENST00000446320 988 ntBASIC4.33□□□□□ -1.72
USP6P35125 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.33□□□□□ -1.72
USP6P35125 AC140076.1-201ENST00000449897 361 ntBASIC4.33□□□□□ -1.72
USP6P35125 MTCO3P16-201ENST00000454456 754 ntBASIC4.33□□□□□ -1.72
USP6P35125 AC107015.1-201ENST00000466902 747 ntBASIC4.33□□□□□ -1.72
USP6P35125 RPS29P26-201ENST00000477483 171 ntBASIC4.33□□□□□ -1.72
USP6P35125 KC877373.1-201ENST00000479066 408 ntBASIC4.33□□□□□ -1.72
USP6P35125 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.33□□□□□ -1.72
USP6P35125 RPL7P47-201ENST00000497299 556 ntBASIC4.33□□□□□ -1.72
USP6P35125 AC021087.2-201ENST00000504656 1203 ntBASIC4.33□□□□□ -1.72
USP6P35125 ACTR6P1-201ENST00000514311 1104 ntBASIC4.33□□□□□ -1.72
USP6P35125 NARSP2-201ENST00000518524 679 ntBASIC4.33□□□□□ -1.72
USP6P35125 AP002404.1-201ENST00000532005 451 ntBASIC4.33□□□□□ -1.72
USP6P35125 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.33□□□□□ -1.72
USP6P35125 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.33□□□□□ -1.72
USP6P35125 CYP2C60P-201ENST00000566088 139 ntBASIC4.33□□□□□ -1.72
USP6P35125 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.33□□□□□ -1.72
USP6P35125 AC019131.2-201ENST00000609071 870 ntBASIC4.33□□□□□ -1.72
USP6P35125 uc_338.1-201ENST00000612113 180 ntBASIC4.33□□□□□ -1.72
USP6P35125 AL450472.3-201ENST00000615578 367 ntBASIC4.33□□□□□ -1.72
USP6P35125 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
USP6P35125 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP6P35125 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.33□□□□□ -1.72
USP6P35125 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP6P35125 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP6P35125 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
USP6P35125 RNU4-7P-201ENST00000364758 141 ntBASIC4.32□□□□□ -1.72
USP6P35125 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP6P35125 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP6P35125 RPL5P19-201ENST00000404228 893 ntBASIC4.32□□□□□ -1.72
USP6P35125 HMGB3P10-201ENST00000434734 572 ntBASIC4.32□□□□□ -1.72
USP6P35125 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.32□□□□□ -1.72
USP6P35125 TRBV8-2-201ENST00000475637 270 ntBASIC4.32□□□□□ -1.72
USP6P35125 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.32□□□□□ -1.72
USP6P35125 HMGB1P47-201ENST00000511281 589 ntBASIC4.32□□□□□ -1.72
USP6P35125 RNU6-889P-201ENST00000517189 103 ntBASIC4.32□□□□□ -1.72
USP6P35125 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.32□□□□□ -1.72
USP6P35125 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP6P35125 SNRPGP1-201ENST00000553864 222 ntBASIC4.32□□□□□ -1.72
USP6P35125 AL358913.1-201ENST00000554342 121 ntBASIC4.32□□□□□ -1.72
USP6P35125 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.32□□□□□ -1.72
USP6P35125 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.32□□□□□ -1.72
USP6P35125 AL162574.2-201ENST00000614618 657 ntBASIC4.32□□□□□ -1.72
USP6P35125 AC092159.4-201ENST00000624944 550 ntBASIC4.32□□□□□ -1.72
USP6P35125 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.32□□□□□ -1.72
USP6P35125 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
USP6P35125 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP6P35125 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USP6P35125 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.32□□□□□ -1.72
USP6P35125 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
USP6P35125 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.32□□□□□ -1.72
USP6P35125 OR5BR1P-201ENST00000524992 1330 ntBASIC4.31□□□□□ -1.72
USP6P35125 AC000123.3-201ENST00000624029 4975 ntBASIC4.31□□□□□ -1.72
USP6P35125 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
USP6P35125 MT-TP-201ENST00000387461 68 ntBASIC4.31□□□□□ -1.72
USP6P35125 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.31□□□□□ -1.72
USP6P35125 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.31□□□□□ -1.72
USP6P35125 CR848007.2-201ENST00000424918 787 ntBASIC4.31□□□□□ -1.72
USP6P35125 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.31□□□□□ -1.72
USP6P35125 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.31□□□□□ -1.72
USP6P35125 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.31□□□□□ -1.72
USP6P35125 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.31□□□□□ -1.72
USP6P35125 AC004924.1-201ENST00000480160 781 ntBASIC4.31□□□□□ -1.72
USP6P35125 PCBP2P3-201ENST00000509726 843 ntBASIC4.31□□□□□ -1.72
USP6P35125 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.31□□□□□ -1.72
USP6P35125 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.31□□□□□ -1.72
USP6P35125 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.31□□□□□ -1.72
USP6P35125 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.31□□□□□ -1.72
USP6P35125 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.31□□□□□ -1.72
USP6P35125 HMGB1P50-201ENST00000605814 607 ntBASIC4.31□□□□□ -1.72
USP6P35125 AC013412.1-201ENST00000610687 192 ntBASIC4.31□□□□□ -1.72
USP6P35125 AC104307.1-201ENST00000616142 196 ntBASIC4.31□□□□□ -1.72
USP6P35125 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.31□□□□□ -1.72
USP6P35125 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.31□□□□□ -1.72
USP6P35125 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.31□□□□□ -1.72
USP6P35125 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms