Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.54□□□□□ -1.84
SHMT2P34897 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.54□□□□□ -1.84
SHMT2P34897 AC068135.1-201ENST00000446164 246 ntBASIC3.54□□□□□ -1.84
SHMT2P34897 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.54□□□□□ -1.84
SHMT2P34897 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.54□□□□□ -1.84
SHMT2P34897 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.54□□□□□ -1.84
SHMT2P34897 PCBP2P3-201ENST00000509726 843 ntBASIC3.54□□□□□ -1.84
SHMT2P34897 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.54□□□□□ -1.84
SHMT2P34897 SNORA67.7-201ENST00000516664 135 ntBASIC3.54□□□□□ -1.84
SHMT2P34897 NDUFB9P3-201ENST00000521269 501 ntBASIC3.54□□□□□ -1.84
SHMT2P34897 AC008562.1-201ENST00000521763 330 ntBASIC3.54□□□□□ -1.84
SHMT2P34897 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHMT2P34897 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.54□□□□□ -1.84
SHMT2P34897 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.54□□□□□ -1.84
SHMT2P34897 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
SHMT2P34897 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.54□□□□□ -1.84
SHMT2P34897 TRAV15-201ENST00000556680 249 ntBASIC3.54□□□□□ -1.84
SHMT2P34897 MIR1254-2-201ENST00000579553 63 ntBASIC3.54□□□□□ -1.84
SHMT2P34897 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.54□□□□□ -1.84
SHMT2P34897 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHMT2P34897 AL365503.1-201ENST00000605247 905 ntBASIC3.54□□□□□ -1.84
SHMT2P34897 FRG1HP-204ENST00000617940 757 ntBASIC3.54□□□□□ -1.84
SHMT2P34897 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SHMT2P34897 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
SHMT2P34897 AL049737.1-201ENST00000413920 1403 ntBASIC3.53□□□□□ -1.84
SHMT2P34897 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SHMT2P34897 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.53□□□□□ -1.84
SHMT2P34897 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHMT2P34897 AC008432.1-201ENST00000615912 1320 ntBASIC3.53□□□□□ -1.84
SHMT2P34897 MFSD8-213ENST00000641134 1327 ntBASIC3.53□□□□□ -1.84
SHMT2P34897 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHMT2P34897 CEP170P1-201ENST00000502249 4587 ntBASIC3.53□□□□□ -1.84
SHMT2P34897 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHMT2P34897 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
SHMT2P34897 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHMT2P34897 AC004022.2-201ENST00000413824 193 ntBASIC3.53□□□□□ -1.84
SHMT2P34897 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.53□□□□□ -1.84
SHMT2P34897 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.53□□□□□ -1.84
SHMT2P34897 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.53□□□□□ -1.84
SHMT2P34897 AC245054.1-201ENST00000420944 258 ntBASIC3.53□□□□□ -1.84
SHMT2P34897 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.53□□□□□ -1.84
SHMT2P34897 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.53□□□□□ -1.84
SHMT2P34897 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.53□□□□□ -1.84
SHMT2P34897 AC091564.1-201ENST00000464563 479 ntBASIC3.53□□□□□ -1.84
SHMT2P34897 RPL21P129-201ENST00000491732 478 ntBASIC3.53□□□□□ -1.84
SHMT2P34897 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.53□□□□□ -1.84
SHMT2P34897 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.53□□□□□ -1.84
SHMT2P34897 SNX5P1-201ENST00000505757 1041 ntBASIC3.53□□□□□ -1.84
SHMT2P34897 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.53□□□□□ -1.84
SHMT2P34897 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.53□□□□□ -1.84
SHMT2P34897 AC027338.1-201ENST00000514840 825 ntBASIC3.53□□□□□ -1.84
SHMT2P34897 AC026403.1-201ENST00000518938 295 ntBASIC3.53□□□□□ -1.84
SHMT2P34897 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.53□□□□□ -1.84
SHMT2P34897 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.53□□□□□ -1.84
SHMT2P34897 GTF2IP22-201ENST00000554443 182 ntBASIC3.53□□□□□ -1.84
SHMT2P34897 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.53□□□□□ -1.84
SHMT2P34897 AC020914.6-201ENST00000594327 272 ntBASIC3.53□□□□□ -1.84
SHMT2P34897 NTAN1P1-201ENST00000603150 646 ntBASIC3.53□□□□□ -1.84
SHMT2P34897 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.53□□□□□ -1.84
SHMT2P34897 STMN1P1-201ENST00000617809 440 ntBASIC3.53□□□□□ -1.84
SHMT2P34897 AL732618.1-201ENST00000623251 301 ntBASIC3.53□□□□□ -1.84
SHMT2P34897 AL034408.1-202ENST00000636088 415 ntBASIC3.53□□□□□ -1.84
SHMT2P34897 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHMT2P34897 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHMT2P34897 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHMT2P34897 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.53□□□□□ -1.84
SHMT2P34897 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
SHMT2P34897 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.53□□□□□ -1.85
SHMT2P34897 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHMT2P34897 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHMT2P34897 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.52□□□□□ -1.85
SHMT2P34897 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHMT2P34897 SAGE2P-201ENST00000420011 2126 ntBASIC3.52□□□□□ -1.85
SHMT2P34897 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHMT2P34897 AL122126.1-201ENST00000546905 1318 ntBASIC3.52□□□□□ -1.85
SHMT2P34897 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHMT2P34897 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHMT2P34897 SNORD56.4-201ENST00000363883 71 ntBASIC3.52□□□□□ -1.85
SHMT2P34897 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.52□□□□□ -1.85
SHMT2P34897 ATF1P1-201ENST00000406040 927 ntBASIC3.52□□□□□ -1.85
SHMT2P34897 PTGES3P2-201ENST00000407942 482 ntBASIC3.52□□□□□ -1.85
SHMT2P34897 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.52□□□□□ -1.85
SHMT2P34897 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.52□□□□□ -1.85
SHMT2P34897 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.52□□□□□ -1.85
SHMT2P34897 AL606495.1-201ENST00000422100 813 ntBASIC3.52□□□□□ -1.85
SHMT2P34897 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.52□□□□□ -1.85
SHMT2P34897 RPS7P5-201ENST00000441482 581 ntBASIC3.52□□□□□ -1.85
SHMT2P34897 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.52□□□□□ -1.85
SHMT2P34897 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.52□□□□□ -1.85
SHMT2P34897 AC078857.1-201ENST00000469870 667 ntBASIC3.52□□□□□ -1.85
SHMT2P34897 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.52□□□□□ -1.85
SHMT2P34897 RPL21P47-201ENST00000483696 477 ntBASIC3.52□□□□□ -1.85
SHMT2P34897 RPS3AP50-201ENST00000487064 803 ntBASIC3.52□□□□□ -1.85
SHMT2P34897 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.52□□□□□ -1.85
SHMT2P34897 NIPA2P2-201ENST00000496376 1083 ntBASIC3.52□□□□□ -1.85
SHMT2P34897 AC008494.2-201ENST00000514544 370 ntBASIC3.52□□□□□ -1.85
SHMT2P34897 IGKV2-23-201ENST00000518729 323 ntBASIC3.52□□□□□ -1.85
SHMT2P34897 COX6B1P6-201ENST00000522347 255 ntBASIC3.52□□□□□ -1.85
SHMT2P34897 AC083923.1-201ENST00000523708 376 ntBASIC3.52□□□□□ -1.85
SHMT2P34897 AC139103.1-201ENST00000534696 1030 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms