Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.15□□□□□ -1.59
SMARCA1P28370 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.15□□□□□ -1.59
SMARCA1P28370 RPL23AP15-201ENST00000450202 459 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.15□□□□□ -1.59
SMARCA1P28370 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.15□□□□□ -1.59
SMARCA1P28370 RPS15AP1-201ENST00000457423 391 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 RPL7P1-201ENST00000468161 747 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 RPL7P9-201ENST00000468715 747 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 RPL21P126-201ENST00000470049 478 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 RN7SL481P-201ENST00000477764 299 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 RN7SL810P-201ENST00000493031 276 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 AC104685.1-201ENST00000502445 371 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 AC113430.1-201ENST00000506872 718 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.15□□□□□ -1.59
SMARCA1P28370 HMGB1P28-201ENST00000507778 552 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 ATP1B1P1-201ENST00000509767 915 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 AC093281.2-201ENST00000510153 597 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.15□□□□□ -1.59
SMARCA1P28370 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.15□□□□□ -1.59
SMARCA1P28370 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.15□□□□□ -1.59
SMARCA1P28370 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.15□□□□□ -1.59
SMARCA1P28370 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.15□□□□□ -1.59
SMARCA1P28370 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.15□□□□□ -1.59
SMARCA1P28370 ATP5J2P6-201ENST00000565203 266 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.15□□□□□ -1.59
SMARCA1P28370 ROCK1P1-201ENST00000573767 549 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.15□□□□□ -1.59
SMARCA1P28370 AC011477.5-201ENST00000586571 259 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.15□□□□□ -1.59
SMARCA1P28370 AC010201.1-201ENST00000605051 540 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 AL158063.1-201ENST00000615349 536 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 AL031667.3-201ENST00000620124 655 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
SMARCA1P28370 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SMARCA1P28370 AC098679.5-201ENST00000624394 571 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 AC026634.1-201ENST00000634369 198 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SMARCA1P28370 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.15□□□□□ -1.59
SMARCA1P28370 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SMARCA1P28370 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SMARCA1P28370 DDX43P2-201ENST00000604753 1354 ntBASIC5.15□□□□□ -1.59
SMARCA1P28370 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SMARCA1P28370 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.14□□□□□ -1.59
SMARCA1P28370 CDR1-202ENST00000625883 1485 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SMARCA1P28370 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SMARCA1P28370 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMARCA1P28370 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMARCA1P28370 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SMARCA1P28370 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMARCA1P28370 Y_RNA.194-201ENST00000363985 102 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.14□□□□□ -1.59
SMARCA1P28370 PRRC2CP1-201ENST00000404428 159 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 AC009480.2-201ENST00000422916 432 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.14□□□□□ -1.59
SMARCA1P28370 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.14□□□□□ -1.59
SMARCA1P28370 AL132765.1-201ENST00000434165 553 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.14□□□□□ -1.59
SMARCA1P28370 OR6C5P-201ENST00000452388 923 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 NDUFA5P7-201ENST00000452914 242 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.14□□□□□ -1.59
SMARCA1P28370 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.14□□□□□ -1.59
SMARCA1P28370 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.14□□□□□ -1.59
SMARCA1P28370 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.14□□□□□ -1.59
SMARCA1P28370 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.14□□□□□ -1.59
SMARCA1P28370 RPS4XP18-201ENST00000495480 763 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.14□□□□□ -1.59
SMARCA1P28370 DSTNP2-201ENST00000504533 515 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.14□□□□□ -1.59
SMARCA1P28370 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.14□□□□□ -1.59
SMARCA1P28370 KRT19P6-201ENST00000510983 209 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 RAB9BP1-201ENST00000519581 626 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 HIGD1AP10-201ENST00000527837 282 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 AC092851.1-201ENST00000535964 478 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.14□□□□□ -1.59
SMARCA1P28370 OR7K1P-201ENST00000546439 926 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 GSTP1P1-201ENST00000548078 319 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.14□□□□□ -1.59
SMARCA1P28370 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.14□□□□□ -1.59
SMARCA1P28370 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.14□□□□□ -1.59
SMARCA1P28370 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SMARCA1P28370 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SMARCA1P28370 RPL23AP97-201ENST00000568955 471 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.14□□□□□ -1.59
SMARCA1P28370 MIR4284-201ENST00000578924 81 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.14□□□□□ -1.59
SMARCA1P28370 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.14□□□□□ -1.59
SMARCA1P28370 AC091946.2-201ENST00000606105 291 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 RN7SKP299-201ENST00000606679 301 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 uc_338.13-201ENST00000618243 179 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SMARCA1P28370 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.14□□□□□ -1.59
SMARCA1P28370 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.14□□□□□ -1.59
SMARCA1P28370 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SMARCA1P28370 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SMARCA1P28370 AL133243.3-201ENST00000617415 3004 ntBASIC5.14□□□□□ -1.59
SMARCA1P28370 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMARCA1P28370 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMARCA1P28370 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SMARCA1P28370 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms