Protein–RNA interactions for Protein: P23468

PTPRD, Receptor-type tyrosine-protein phosphatase delta, humanhuman

Predictions only

Length 1,912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRDP23468 AC091903.1-201ENST00000624322 454 ntBASIC3.19□□□□□ -1.9
PTPRDP23468 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PTPRDP23468 MIR6715B-201ENST00000637172 77 ntBASIC3.19□□□□□ -1.9
PTPRDP23468 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PTPRDP23468 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTPRDP23468 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTPRDP23468 OR5H2-201ENST00000355273 945 ntBASIC3.18□□□□□ -1.9
PTPRDP23468 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PTPRDP23468 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PTPRDP23468 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPRDP23468 SNORD15B-201ENST00000384714 146 ntBASIC3.18□□□□□ -1.9
PTPRDP23468 AL583834.1-201ENST00000406943 343 ntBASIC3.18□□□□□ -1.9
PTPRDP23468 RN7SKP285-201ENST00000410137 318 ntBASIC3.18□□□□□ -1.9
PTPRDP23468 RN7SKP220-201ENST00000410611 288 ntBASIC3.18□□□□□ -1.9
PTPRDP23468 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PTPRDP23468 AC004801.2-202ENST00000463559 283 ntBASIC3.18□□□□□ -1.9
PTPRDP23468 AC106872.2-201ENST00000494303 480 ntBASIC3.18□□□□□ -1.9
PTPRDP23468 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.18□□□□□ -1.9
PTPRDP23468 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPRDP23468 GTF3AP2-201ENST00000557014 266 ntBASIC3.18□□□□□ -1.9
PTPRDP23468 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPRDP23468 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.18□□□□□ -1.9
PTPRDP23468 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PTPRDP23468 AC116312.1-201ENST00000606841 314 ntBASIC3.18□□□□□ -1.9
PTPRDP23468 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PTPRDP23468 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.18□□□□□ -1.9
PTPRDP23468 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PTPRDP23468 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PTPRDP23468 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRDP23468 DUTP6-201ENST00000425573 462 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 RWDD4P2-201ENST00000426392 563 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 MTCO1P51-201ENST00000427672 1060 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.17□□□□□ -1.9
PTPRDP23468 HMGB3P6-201ENST00000444896 598 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 AC099063.2-201ENST00000446360 662 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 AC016696.1-201ENST00000446949 318 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPRDP23468 PRDX3P4-201ENST00000470828 747 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 RWDD4P1-201ENST00000488019 565 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 RPL5P23-201ENST00000496040 868 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 PRELID3BP6-201ENST00000503839 571 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 AC024153.1-201ENST00000603103 365 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 AC099506.2-201ENST00000623074 221 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 AC132825.8-201ENST00000640783 297 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRDP23468 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRDP23468 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRDP23468 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
PTPRDP23468 AC004972.1-201ENST00000623934 2209 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 OR5BR1P-201ENST00000524992 1330 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRDP23468 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRDP23468 SNORA9.2-201ENST00000365361 133 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 RNU6-178P-201ENST00000384631 104 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 SNORA46-201ENST00000384762 135 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRDP23468 AC108734.1-201ENST00000439549 399 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.17□□□□□ -1.9
PTPRDP23468 RN7SL20P-201ENST00000488827 297 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPRDP23468 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPRDP23468 AC092851.1-201ENST00000535964 478 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 AC135001.1-201ENST00000544546 283 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPRDP23468 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRDP23468 AC008121.2-201ENST00000614647 523 ntBASIC3.17□□□□□ -1.9
PTPRDP23468 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.17□□□□□ -1.9
PTPRDP23468 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.17□□□□□ -1.9
PTPRDP23468 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTPRDP23468 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTPRDP23468 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTPRDP23468 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTPRDP23468 AL049555.1-201ENST00000562834 1933 ntBASIC3.16□□□□□ -1.9
PTPRDP23468 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PTPRDP23468 AC239798.3-201ENST00000454459 408 ntBASIC3.16□□□□□ -1.9
PTPRDP23468 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPRDP23468 VN1R104P-201ENST00000505115 1009 ntBASIC3.16□□□□□ -1.9
PTPRDP23468 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPRDP23468 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPRDP23468 MIR4513-201ENST00000581077 86 ntBASIC3.16□□□□□ -1.9
PTPRDP23468 MIR7106-201ENST00000612419 65 ntBASIC3.16□□□□□ -1.9
PTPRDP23468 AC078899.5-201ENST00000612475 178 ntBASIC3.16□□□□□ -1.9
PTPRDP23468 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPRDP23468 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
PTPRDP23468 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PTPRDP23468 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.16□□□□□ -1.9
PTPRDP23468 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PTPRDP23468 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PTPRDP23468 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
PTPRDP23468 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPRDP23468 AC090971.4-201ENST00000560291 1800 ntBASIC3.16□□□□□ -1.9
PTPRDP23468 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.16□□□□□ -1.9
PTPRDP23468 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTPRDP23468 AC015813.6-201ENST00000624409 5808 ntBASIC3.15□□□□□ -1.9
PTPRDP23468 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
PTPRDP23468 MIR422A-201ENST00000362286 90 ntBASIC3.15□□□□□ -1.9
PTPRDP23468 RN7SKP44-201ENST00000363602 316 ntBASIC3.15□□□□□ -1.9
PTPRDP23468 SNORA5B-201ENST00000363786 132 ntBASIC3.15□□□□□ -1.9
PTPRDP23468 RNU6-7-201ENST00000364784 107 ntBASIC3.15□□□□□ -1.9
PTPRDP23468 RNU6-8-201ENST00000365467 107 ntBASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms