Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.49□□□□□ -1.37
RFX1P22670 AC114797.1-201ENST00000514003 728 ntBASIC6.49□□□□□ -1.37
RFX1P22670 RNU7-30P-201ENST00000516835 62 ntBASIC6.49□□□□□ -1.37
RFX1P22670 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.49□□□□□ -1.37
RFX1P22670 IGKV2-18-201ENST00000522607 343 ntBASIC6.49□□□□□ -1.37
RFX1P22670 SUB1P1-201ENST00000524415 382 ntBASIC6.49□□□□□ -1.37
RFX1P22670 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.49□□□□□ -1.37
RFX1P22670 BNIP3P6-201ENST00000549284 499 ntBASIC6.49□□□□□ -1.37
RFX1P22670 AL163952.1-202ENST00000569625 600 ntBASIC6.49□□□□□ -1.37
RFX1P22670 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.49□□□□□ -1.37
RFX1P22670 SNORD95-201ENST00000579879 68 ntBASIC6.49□□□□□ -1.37
RFX1P22670 MIR4512-201ENST00000583257 77 ntBASIC6.49□□□□□ -1.37
RFX1P22670 AC004908.2-201ENST00000609090 574 ntBASIC6.49□□□□□ -1.37
RFX1P22670 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.49□□□□□ -1.37
RFX1P22670 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.49□□□□□ -1.37
RFX1P22670 RN7SL787P-201ENST00000613000 284 ntBASIC6.49□□□□□ -1.37
RFX1P22670 AC009248.2-201ENST00000619826 254 ntBASIC6.49□□□□□ -1.37
RFX1P22670 AC244100.1-202ENST00000621554 382 ntBASIC6.49□□□□□ -1.37
RFX1P22670 AL160413.1-201ENST00000622780 310 ntBASIC6.49□□□□□ -1.37
RFX1P22670 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RFX1P22670 OR4G1P-203ENST00000641984 1631 ntBASIC6.49□□□□□ -1.37
RFX1P22670 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.49□□□□□ -1.37
RFX1P22670 AC097063.1-201ENST00000426714 1797 ntBASIC6.49□□□□□ -1.37
RFX1P22670 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RFX1P22670 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
RFX1P22670 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RFX1P22670 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RFX1P22670 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFX1P22670 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFX1P22670 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFX1P22670 MIR558-201ENST00000384920 94 ntBASIC6.48□□□□□ -1.37
RFX1P22670 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC6.48□□□□□ -1.37
RFX1P22670 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.48□□□□□ -1.37
RFX1P22670 MED13P1-201ENST00000428342 171 ntBASIC6.48□□□□□ -1.37
RFX1P22670 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RFX1P22670 Z95327.1-201ENST00000446082 482 ntBASIC6.48□□□□□ -1.37
RFX1P22670 MRPL50P4-201ENST00000446432 475 ntBASIC6.48□□□□□ -1.37
RFX1P22670 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.48□□□□□ -1.37
RFX1P22670 SDC4P-201ENST00000453285 601 ntBASIC6.48□□□□□ -1.37
RFX1P22670 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC6.48□□□□□ -1.37
RFX1P22670 HMGN1P10-201ENST00000474557 553 ntBASIC6.48□□□□□ -1.37
RFX1P22670 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RFX1P22670 EIF4EP3-201ENST00000498782 656 ntBASIC6.48□□□□□ -1.37
RFX1P22670 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC6.48□□□□□ -1.37
RFX1P22670 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RFX1P22670 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.48□□□□□ -1.37
RFX1P22670 TOMM22P4-201ENST00000511318 336 ntBASIC6.48□□□□□ -1.37
RFX1P22670 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC6.48□□□□□ -1.37
RFX1P22670 AC087241.2-201ENST00000535801 324 ntBASIC6.48□□□□□ -1.37
RFX1P22670 MGST1-215ENST00000540056 546 ntTSL 3 BASIC6.48□□□□□ -1.37
RFX1P22670 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.48□□□□□ -1.37
RFX1P22670 MTCO3P13-201ENST00000577757 781 ntBASIC6.48□□□□□ -1.37
RFX1P22670 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC6.48□□□□□ -1.37
RFX1P22670 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.48□□□□□ -1.37
RFX1P22670 AL355812.1-201ENST00000603215 216 ntBASIC6.48□□□□□ -1.37
RFX1P22670 AL590099.1-201ENST00000615276 138 ntBASIC6.48□□□□□ -1.37
RFX1P22670 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.48□□□□□ -1.37
RFX1P22670 MIR6730-201ENST00000622213 67 ntBASIC6.48□□□□□ -1.37
RFX1P22670 AC073488.3-201ENST00000631611 778 ntBASIC6.48□□□□□ -1.37
RFX1P22670 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.48□□□□□ -1.37
RFX1P22670 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFX1P22670 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC6.48□□□□□ -1.37
RFX1P22670 SNX18P3-202ENST00000565670 1750 ntBASIC6.48□□□□□ -1.37
RFX1P22670 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.48□□□□□ -1.37
RFX1P22670 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
RFX1P22670 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
RFX1P22670 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
RFX1P22670 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFX1P22670 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
RFX1P22670 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
RFX1P22670 AL672167.1-205ENST00000641112 3080 ntBASIC6.47□□□□□ -1.37
RFX1P22670 ZNF734P-201ENST00000419494 1534 ntBASIC6.47□□□□□ -1.37
RFX1P22670 AC007159.1-201ENST00000566529 4706 ntBASIC6.47□□□□□ -1.37
RFX1P22670 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
RFX1P22670 HSPE1P11-201ENST00000339579 310 ntBASIC6.47□□□□□ -1.37
RFX1P22670 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFX1P22670 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFX1P22670 Y_RNA.58-201ENST00000362807 102 ntBASIC6.47□□□□□ -1.37
RFX1P22670 Y_RNA.154-201ENST00000363624 102 ntBASIC6.47□□□□□ -1.37
RFX1P22670 RNU1-146P-201ENST00000364015 165 ntBASIC6.47□□□□□ -1.37
RFX1P22670 RNVU1-3-201ENST00000364313 161 ntBASIC6.47□□□□□ -1.37
RFX1P22670 RNY3P1-201ENST00000365085 102 ntBASIC6.47□□□□□ -1.37
RFX1P22670 RNY3-201ENST00000365484 102 ntBASIC6.47□□□□□ -1.37
RFX1P22670 Y_RNA.367-201ENST00000365544 101 ntBASIC6.47□□□□□ -1.37
RFX1P22670 SNORD51-201ENST00000384320 80 ntBASIC6.47□□□□□ -1.37
RFX1P22670 Y_RNA.490-201ENST00000384413 102 ntBASIC6.47□□□□□ -1.37
RFX1P22670 RNU6-692P-201ENST00000384496 107 ntBASIC6.47□□□□□ -1.37
RFX1P22670 MIR454-201ENST00000390180 115 ntBASIC6.47□□□□□ -1.37
RFX1P22670 RNU6-278P-201ENST00000390945 109 ntBASIC6.47□□□□□ -1.37
RFX1P22670 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.47□□□□□ -1.37
RFX1P22670 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.47□□□□□ -1.37
RFX1P22670 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC6.47□□□□□ -1.37
RFX1P22670 AL354751.2-201ENST00000415471 210 ntBASIC6.47□□□□□ -1.37
RFX1P22670 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.47□□□□□ -1.37
RFX1P22670 FTLP8-201ENST00000446770 267 ntBASIC6.47□□□□□ -1.37
RFX1P22670 AC073415.1-201ENST00000449240 153 ntBASIC6.47□□□□□ -1.37
RFX1P22670 AC010733.1-201ENST00000451515 401 ntBASIC6.47□□□□□ -1.37
RFX1P22670 AL513533.1-201ENST00000453728 415 ntBASIC6.47□□□□□ -1.37
RFX1P22670 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.47□□□□□ -1.37
RFX1P22670 ACA64.4-201ENST00000459070 127 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms