Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 MTND5P31-201ENST00000419366 1374 ntBASIC4.15□□□□□ -1.74
PDGFRAP16234 ELL2P4-201ENST00000446870 1376 ntBASIC4.15□□□□□ -1.74
PDGFRAP16234 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PDGFRAP16234 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.15□□□□□ -1.74
PDGFRAP16234 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
PDGFRAP16234 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PDGFRAP16234 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.15□□□□□ -1.75
PDGFRAP16234 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.15□□□□□ -1.75
PDGFRAP16234 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.15□□□□□ -1.75
PDGFRAP16234 RPS3AP9-201ENST00000417027 792 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 NANOGP6-201ENST00000429190 847 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 KCTD9P3-201ENST00000434597 1169 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 B3GNT2P1-201ENST00000434960 952 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 HMGB1P37-201ENST00000439613 609 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.15□□□□□ -1.75
PDGFRAP16234 PPIAP3-201ENST00000450588 505 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.15□□□□□ -1.75
PDGFRAP16234 AC146507.1-201ENST00000468335 354 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 AC110792.1-201ENST00000491826 472 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 AC139783.2-201ENST00000504847 1145 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.15□□□□□ -1.75
PDGFRAP16234 AC048346.1-201ENST00000510247 144 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.15□□□□□ -1.75
PDGFRAP16234 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.15□□□□□ -1.75
PDGFRAP16234 RNA5SP179-201ENST00000517284 121 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.15□□□□□ -1.75
PDGFRAP16234 AC010376.1-201ENST00000522101 334 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 NDUFS5P6-201ENST00000529136 295 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 AC118942.1-201ENST00000529674 1035 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 OR8L1P-201ENST00000534005 955 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.15□□□□□ -1.75
PDGFRAP16234 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.15□□□□□ -1.75
PDGFRAP16234 MIR4644-201ENST00000579929 84 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 AL606834.3-201ENST00000602615 496 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 AL139395.1-201ENST00000603662 160 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 AC091167.4-201ENST00000605079 184 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 AP000238.1-201ENST00000608759 426 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 AL139089.1-201ENST00000620372 975 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 MIR6500-201ENST00000622700 86 ntBASIC4.15□□□□□ -1.75
PDGFRAP16234 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDGFRAP16234 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDGFRAP16234 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDGFRAP16234 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDGFRAP16234 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PDGFRAP16234 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDGFRAP16234 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFRAP16234 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFRAP16234 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFRAP16234 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFRAP16234 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.14□□□□□ -1.75
PDGFRAP16234 AC106871.1-201ENST00000568324 3102 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 ANKRD36P1-201ENST00000344424 659 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 MIR620-201ENST00000385232 95 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 MTCO3P31-201ENST00000405526 789 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 ZNF603P-201ENST00000405613 487 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 BTF3P8-201ENST00000414577 526 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 PTP4A1P5-201ENST00000420305 455 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 AC092647.1-201ENST00000420654 287 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.14□□□□□ -1.75
PDGFRAP16234 AC096638.2-201ENST00000434965 711 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 PPIAP17-201ENST00000438507 471 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 EXTL2P1-201ENST00000446218 416 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.14□□□□□ -1.75
PDGFRAP16234 FCF1P6-201ENST00000456841 595 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 NF1P3-201ENST00000457709 450 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 RPL9P32-201ENST00000464118 620 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.14□□□□□ -1.75
PDGFRAP16234 AC146944.2-203ENST00000502493 354 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.14□□□□□ -1.75
PDGFRAP16234 AC011352.3-201ENST00000505162 593 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 AC139495.1-202ENST00000513164 354 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.14□□□□□ -1.75
PDGFRAP16234 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFRAP16234 SNORA70.14-201ENST00000516205 110 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 RNA5SP135-201ENST00000517019 125 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFRAP16234 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.14□□□□□ -1.75
PDGFRAP16234 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.14□□□□□ -1.75
PDGFRAP16234 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.14□□□□□ -1.75
PDGFRAP16234 YWHAZP1-201ENST00000556286 722 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.14□□□□□ -1.75
PDGFRAP16234 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.14□□□□□ -1.75
PDGFRAP16234 BNIP3P5-201ENST00000562290 498 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 MIR4286-201ENST00000580651 93 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 RNA5SP108-201ENST00000605921 117 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.14□□□□□ -1.75
PDGFRAP16234 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFRAP16234 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.14□□□□□ -1.75
PDGFRAP16234 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PDGFRAP16234 AC109454.4-201ENST00000623411 649 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 AC138649.5-201ENST00000637456 137 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 AC013437.2-201ENST00000639587 677 ntBASIC4.14□□□□□ -1.75
PDGFRAP16234 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.14□□□□□ -1.75
PDGFRAP16234 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFRAP16234 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.14□□□□□ -1.75
PDGFRAP16234 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDGFRAP16234 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDGFRAP16234 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.13□□□□□ -1.75
PDGFRAP16234 AP002001.2-201ENST00000529025 1469 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms