Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.44□□□□□ -1.86
COL11A1P12107 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.44□□□□□ -1.86
COL11A1P12107 AL139281.1-201ENST00000422120 335 ntBASIC3.44□□□□□ -1.86
COL11A1P12107 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC3.44□□□□□ -1.86
COL11A1P12107 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.44□□□□□ -1.86
COL11A1P12107 AC011602.1-201ENST00000546484 331 ntBASIC3.44□□□□□ -1.86
COL11A1P12107 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.44□□□□□ -1.86
COL11A1P12107 AL592295.2-201ENST00000612578 206 ntBASIC3.44□□□□□ -1.86
COL11A1P12107 AC108206.1-201ENST00000570186 4159 ntBASIC3.44□□□□□ -1.86
COL11A1P12107 NEAT1-202ENST00000501122 22743 ntBASIC3.44□□□□□ -1.86
COL11A1P12107 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
COL11A1P12107 ELL2P4-201ENST00000446870 1376 ntBASIC3.43□□□□□ -1.86
COL11A1P12107 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
COL11A1P12107 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.43□□□□□ -1.86
COL11A1P12107 RPL7P26-201ENST00000333817 754 ntBASIC3.43□□□□□ -1.86
COL11A1P12107 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.43□□□□□ -1.86
COL11A1P12107 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.43□□□□□ -1.86
COL11A1P12107 ELOCP23-201ENST00000452014 332 ntBASIC3.43□□□□□ -1.86
COL11A1P12107 MRPL35P4-201ENST00000453682 566 ntBASIC3.43□□□□□ -1.86
COL11A1P12107 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.43□□□□□ -1.86
COL11A1P12107 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.43□□□□□ -1.86
COL11A1P12107 OR5G4P-201ENST00000525251 760 ntBASIC3.43□□□□□ -1.86
COL11A1P12107 H3F3AP1-201ENST00000559984 334 ntBASIC3.43□□□□□ -1.86
COL11A1P12107 RMST_8.1-201ENST00000610287 165 ntBASIC3.43□□□□□ -1.86
COL11A1P12107 AC022509.4-201ENST00000621404 572 ntBASIC3.43□□□□□ -1.86
COL11A1P12107 AC074140.1-201ENST00000621617 208 ntBASIC3.43□□□□□ -1.86
COL11A1P12107 AC007998.5-201ENST00000622938 237 ntBASIC3.43□□□□□ -1.86
COL11A1P12107 AL359757.2-201ENST00000624309 274 ntBASIC3.43□□□□□ -1.86
COL11A1P12107 AC091903.1-201ENST00000624322 454 ntBASIC3.43□□□□□ -1.86
COL11A1P12107 AC073476.4-201ENST00000628409 72 ntBASIC3.43□□□□□ -1.86
COL11A1P12107 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.43□□□□□ -1.86
COL11A1P12107 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.43□□□□□ -1.86
COL11A1P12107 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.42□□□□□ -1.86
COL11A1P12107 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL11A1P12107 RNU2-22P-201ENST00000411266 212 ntBASIC3.42□□□□□ -1.86
COL11A1P12107 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.42□□□□□ -1.86
COL11A1P12107 PPIAP17-201ENST00000438507 471 ntBASIC3.42□□□□□ -1.86
COL11A1P12107 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.42□□□□□ -1.86
COL11A1P12107 AL589765.3-201ENST00000446084 462 ntBASIC3.42□□□□□ -1.86
COL11A1P12107 AC108078.3-201ENST00000502633 489 ntBASIC3.42□□□□□ -1.86
COL11A1P12107 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.42□□□□□ -1.86
COL11A1P12107 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.42□□□□□ -1.86
COL11A1P12107 AC092851.1-201ENST00000535964 478 ntBASIC3.42□□□□□ -1.86
COL11A1P12107 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.42□□□□□ -1.86
COL11A1P12107 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.42□□□□□ -1.86
COL11A1P12107 AL590240.3-201ENST00000621416 943 ntBASIC3.42□□□□□ -1.86
COL11A1P12107 AC233263.6-201ENST00000631132 1963 ntBASIC3.42□□□□□ -1.86
COL11A1P12107 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
COL11A1P12107 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL11A1P12107 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.42□□□□□ -1.86
COL11A1P12107 AC000403.1-201ENST00000613696 3585 ntBASIC3.42□□□□□ -1.86
COL11A1P12107 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.42□□□□□ -1.86
COL11A1P12107 AC011503.2-201ENST00000594230 1500 ntBASIC3.42□□□□□ -1.86
COL11A1P12107 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.42□□□□□ -1.86
COL11A1P12107 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.42□□□□□ -1.86
COL11A1P12107 RPL30P2-201ENST00000414021 291 ntBASIC3.42□□□□□ -1.86
COL11A1P12107 RPL32P35-201ENST00000415214 394 ntBASIC3.42□□□□□ -1.86
COL11A1P12107 AC019097.1-201ENST00000424783 735 ntBASIC3.42□□□□□ -1.86
COL11A1P12107 RPL7P59-201ENST00000447700 943 ntBASIC3.42□□□□□ -1.86
COL11A1P12107 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.42□□□□□ -1.86
COL11A1P12107 RN7SL20P-201ENST00000488827 297 ntBASIC3.42□□□□□ -1.86
COL11A1P12107 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.42□□□□□ -1.86
COL11A1P12107 VWA8P1-201ENST00000510889 176 ntBASIC3.42□□□□□ -1.86
COL11A1P12107 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
COL11A1P12107 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.42□□□□□ -1.86
COL11A1P12107 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.42□□□□□ -1.86
COL11A1P12107 AL137790.1-201ENST00000634283 177 ntBASIC3.42□□□□□ -1.86
COL11A1P12107 MTCO1P24-201ENST00000515438 1558 ntBASIC3.42□□□□□ -1.86
COL11A1P12107 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL11A1P12107 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL11A1P12107 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL11A1P12107 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
COL11A1P12107 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL11A1P12107 OR5J1P-201ENST00000313544 939 ntBASIC3.41□□□□□ -1.86
COL11A1P12107 ARF4P3-201ENST00000397387 509 ntBASIC3.41□□□□□ -1.86
COL11A1P12107 RNA5SP367-201ENST00000516557 118 ntBASIC3.41□□□□□ -1.86
COL11A1P12107 SNORA31.21-201ENST00000517180 77 ntBASIC3.41□□□□□ -1.86
COL11A1P12107 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.41□□□□□ -1.86
COL11A1P12107 KC877982.1-201ENST00000602313 470 ntBASIC3.41□□□□□ -1.86
COL11A1P12107 AC231759.1-201ENST00000616455 597 ntBASIC3.41□□□□□ -1.86
COL11A1P12107 MTND4P10-201ENST00000446199 1363 ntBASIC3.41□□□□□ -1.86
COL11A1P12107 MTND5P24-201ENST00000438892 1767 ntBASIC3.41□□□□□ -1.86
COL11A1P12107 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL11A1P12107 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL11A1P12107 OR52B1P-201ENST00000316506 909 ntBASIC3.4□□□□□ -1.86
COL11A1P12107 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
COL11A1P12107 XGY1-201ENST00000381172 446 ntBASIC3.4□□□□□ -1.86
COL11A1P12107 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.4□□□□□ -1.86
COL11A1P12107 ARL5AP4-201ENST00000430731 512 ntBASIC3.4□□□□□ -1.86
COL11A1P12107 RPL7L1P1-201ENST00000448259 785 ntBASIC3.4□□□□□ -1.86
COL11A1P12107 NIPA2P5-201ENST00000452282 464 ntBASIC3.4□□□□□ -1.86
COL11A1P12107 RPS17P11-201ENST00000474297 293 ntBASIC3.4□□□□□ -1.86
COL11A1P12107 HIGD1AP13-201ENST00000509878 289 ntBASIC3.4□□□□□ -1.86
COL11A1P12107 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.4□□□□□ -1.86
COL11A1P12107 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.4□□□□□ -1.86
COL11A1P12107 AC110741.2-201ENST00000605278 268 ntBASIC3.4□□□□□ -1.86
COL11A1P12107 uc_338.1-201ENST00000612113 180 ntBASIC3.4□□□□□ -1.86
COL11A1P12107 U7.8-201ENST00000619968 63 ntBASIC3.4□□□□□ -1.86
COL11A1P12107 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.4□□□□□ -1.86
COL11A1P12107 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms