Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 AC117529.2-201ENST00000512159 2068 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 RNU1-15P-201ENST00000353977 144 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 RNA5SP513-201ENST00000364648 118 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 SUGT1P1-201ENST00000379514 476 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 RNU6-1226P-201ENST00000384317 107 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 SNORA70E-201ENST00000384492 135 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 RPL23AP47-201ENST00000408017 460 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 SSR1P2-201ENST00000415208 787 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 RPS12P23-201ENST00000419579 400 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 RWDD4P2-201ENST00000426392 563 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 AL117339.2-201ENST00000430475 180 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 AL353748.1-201ENST00000440753 474 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 RPL7P22-201ENST00000466005 733 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 MTCO3P35-201ENST00000485582 781 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 RNF138P1-201ENST00000502765 546 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 AC108064.1-201ENST00000513791 460 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 AC104057.1-201ENST00000515547 497 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 RNU6-311P-201ENST00000516224 102 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 AP000790.1-201ENST00000528891 737 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 MTND1P24-201ENST00000552175 861 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 MIR1254-2-201ENST00000579553 63 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 MIR4286-201ENST00000580651 93 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 SNORD39.3-201ENST00000584451 71 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 AL390838.2-201ENST00000602394 274 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 AC092954.1-201ENST00000609121 445 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 AC068722.2-201ENST00000618734 544 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 AC022509.4-201ENST00000621404 572 ntBASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RAB40ALP0C0E4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 MIR372-201ENST00000362225 67 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 RNU6-251P-201ENST00000363235 104 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 RNA5SP283-201ENST00000365604 119 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 AC025750.1-201ENST00000399891 379 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 RN7SKP167-201ENST00000411047 285 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 OR8G2P-201ENST00000412796 908 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 MTND4P22-201ENST00000413116 1169 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 AC004552.1-201ENST00000419089 348 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 RBMY1KP-201ENST00000423480 476 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 MTCO2P17-201ENST00000424336 677 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 HLA-N-201ENST00000437516 135 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 RPL21P89-201ENST00000444021 467 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 RPS26P3-201ENST00000470205 348 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 RPL21P103-201ENST00000479921 488 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 AC090543.2-201ENST00000483963 348 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 AC004057.1-201ENST00000485827 348 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 AC020699.1-201ENST00000505161 445 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 MTCYBP16-201ENST00000509187 1129 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 IFITM8P-201ENST00000522529 394 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 DEFB109D-201ENST00000529497 240 ntBASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.97□□□□□ -1.77
RAB40ALP0C0E4 LSM6P2-201ENST00000552208 177 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms