Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.67□□□□□ -1.82
MT-ND1P03886 TOMM20P2-201ENST00000540082 421 ntBASIC3.67□□□□□ -1.82
MT-ND1P03886 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
MT-ND1P03886 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.67□□□□□ -1.82
MT-ND1P03886 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.67□□□□□ -1.82
MT-ND1P03886 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.67□□□□□ -1.82
MT-ND1P03886 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.67□□□□□ -1.82
MT-ND1P03886 EIF5A2P1-201ENST00000564027 460 ntBASIC3.67□□□□□ -1.82
MT-ND1P03886 AGGF1P5-201ENST00000567900 919 ntBASIC3.67□□□□□ -1.82
MT-ND1P03886 MTCO1P40-201ENST00000574371 625 ntBASIC3.67□□□□□ -1.82
MT-ND1P03886 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.67□□□□□ -1.82
MT-ND1P03886 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.67□□□□□ -1.82
MT-ND1P03886 AC006116.5-201ENST00000591936 559 ntBASIC3.67□□□□□ -1.82
MT-ND1P03886 AC024060.1-201ENST00000607052 494 ntBASIC3.67□□□□□ -1.82
MT-ND1P03886 RNU4-5P-201ENST00000607255 135 ntBASIC3.67□□□□□ -1.82
MT-ND1P03886 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.67□□□□□ -1.82
MT-ND1P03886 AC011944.2-201ENST00000624440 683 ntBASIC3.67□□□□□ -1.82
MT-ND1P03886 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.67□□□□□ -1.82
MT-ND1P03886 AC008993.2-201ENST00000631744 806 ntBASIC3.67□□□□□ -1.82
MT-ND1P03886 OR5BE1P-202ENST00000641168 1176 ntBASIC3.67□□□□□ -1.82
MT-ND1P03886 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
MT-ND1P03886 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
MT-ND1P03886 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
MT-ND1P03886 AC073055.1-201ENST00000456901 1621 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
MT-ND1P03886 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.66□□□□□ -1.82
MT-ND1P03886 LARP1BP1-201ENST00000506036 1359 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 PABPC1P7-201ENST00000413177 1513 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
MT-ND1P03886 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.66□□□□□ -1.82
MT-ND1P03886 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
MT-ND1P03886 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
MT-ND1P03886 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
MT-ND1P03886 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.66□□□□□ -1.82
MT-ND1P03886 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
MT-ND1P03886 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 RNU6-236P-201ENST00000363886 106 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
MT-ND1P03886 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.66□□□□□ -1.82
MT-ND1P03886 RNU6-77P-201ENST00000410554 91 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 HSPE1P12-201ENST00000412576 301 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.66□□□□□ -1.82
MT-ND1P03886 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.66□□□□□ -1.82
MT-ND1P03886 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.66□□□□□ -1.82
MT-ND1P03886 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.66□□□□□ -1.82
MT-ND1P03886 AL592293.2-201ENST00000422292 996 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.66□□□□□ -1.82
MT-ND1P03886 DNAJC19P7-201ENST00000428811 344 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.66□□□□□ -1.82
MT-ND1P03886 PTGES3P1-201ENST00000439531 483 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.66□□□□□ -1.82
MT-ND1P03886 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.66□□□□□ -1.82
MT-ND1P03886 AL929288.2-201ENST00000446368 407 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 RPS11P1-201ENST00000451072 473 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.66□□□□□ -1.82
MT-ND1P03886 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
MT-ND1P03886 RPL6P9-201ENST00000466502 859 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 UQCRHP4-201ENST00000471686 272 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 AC087879.1-201ENST00000474343 374 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.66□□□□□ -1.82
MT-ND1P03886 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.66□□□□□ -1.82
MT-ND1P03886 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 RNU6-202P-201ENST00000515998 96 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.66□□□□□ -1.82
MT-ND1P03886 AC104417.1-201ENST00000523974 751 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.66□□□□□ -1.82
MT-ND1P03886 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.66□□□□□ -1.82
MT-ND1P03886 NDUFS5P6-201ENST00000529136 295 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.66□□□□□ -1.82
MT-ND1P03886 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.66□□□□□ -1.82
MT-ND1P03886 AP004242.1-201ENST00000533701 349 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 AC090877.1-201ENST00000561418 344 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.66□□□□□ -1.82
MT-ND1P03886 MIR4277-201ENST00000578298 84 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 MIR4330-201ENST00000579077 105 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.66□□□□□ -1.82
MT-ND1P03886 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.66□□□□□ -1.82
MT-ND1P03886 IPO5P1-202ENST00000600039 287 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 RPP40P2-201ENST00000603596 712 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 AL009028.1-201ENST00000604895 802 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 MIR8059-201ENST00000620427 81 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 AC068620.4-201ENST00000636730 1182 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.66□□□□□ -1.82
MT-ND1P03886 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
MT-ND1P03886 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
MT-ND1P03886 OR6C71P-202ENST00000641886 1107 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 AC073073.2-201ENST00000609827 2578 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
MT-ND1P03886 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
MT-ND1P03886 SEPT7P7-201ENST00000420492 1301 ntBASIC3.66□□□□□ -1.82
MT-ND1P03886 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
MT-ND1P03886 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
MT-ND1P03886 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
MT-ND1P03886 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
MT-ND1P03886 AC111188.2-201ENST00000529697 1387 ntBASIC3.65□□□□□ -1.82
MT-ND1P03886 AC025263.3-201ENST00000622965 1396 ntBASIC3.65□□□□□ -1.82
MT-ND1P03886 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
MT-ND1P03886 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.82
MT-ND1P03886 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms