Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
COL1A1P02452 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL1A1P02452 AP003122.5-201ENST00000527668 3766 ntBASIC3.72□□□□□ -1.81
COL1A1P02452 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
COL1A1P02452 EEF1A1P41-201ENST00000414667 207 ntBASIC3.72□□□□□ -1.81
COL1A1P02452 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.72□□□□□ -1.81
COL1A1P02452 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.72□□□□□ -1.81
COL1A1P02452 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.72□□□□□ -1.81
COL1A1P02452 DNAJC19P8-201ENST00000452887 259 ntBASIC3.72□□□□□ -1.81
COL1A1P02452 AC108078.3-201ENST00000502633 489 ntBASIC3.72□□□□□ -1.81
COL1A1P02452 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.72□□□□□ -1.81
COL1A1P02452 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.72□□□□□ -1.81
COL1A1P02452 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.72□□□□□ -1.81
COL1A1P02452 AP003485.2-201ENST00000623636 610 ntBASIC3.72□□□□□ -1.81
COL1A1P02452 AC005183.1-201ENST00000603687 1979 ntBASIC3.72□□□□□ -1.81
COL1A1P02452 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.72□□□□□ -1.81
COL1A1P02452 AC096644.4-201ENST00000563417 2912 ntBASIC3.72□□□□□ -1.81
COL1A1P02452 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
COL1A1P02452 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.71□□□□□ -1.81
COL1A1P02452 AL672296.1-201ENST00000427780 2158 ntBASIC3.71□□□□□ -1.81
COL1A1P02452 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.71□□□□□ -1.82
COL1A1P02452 ZNF826P-207ENST00000622273 1910 ntBASIC3.71□□□□□ -1.82
COL1A1P02452 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COL1A1P02452 OR1S2-201ENST00000302592 978 ntBASIC3.71□□□□□ -1.82
COL1A1P02452 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.71□□□□□ -1.82
COL1A1P02452 MIR449A-201ENST00000362113 91 ntBASIC3.71□□□□□ -1.82
COL1A1P02452 RPS12P23-201ENST00000419579 400 ntBASIC3.71□□□□□ -1.82
COL1A1P02452 AC013410.1-201ENST00000436223 1232 ntBASIC3.71□□□□□ -1.82
COL1A1P02452 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL1A1P02452 AC105272.1-201ENST00000438604 198 ntBASIC3.71□□□□□ -1.82
COL1A1P02452 PRDX3P4-201ENST00000470828 747 ntBASIC3.71□□□□□ -1.82
COL1A1P02452 RPS4XP13-201ENST00000483219 789 ntBASIC3.71□□□□□ -1.82
COL1A1P02452 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.71□□□□□ -1.82
COL1A1P02452 GTF3AP2-201ENST00000557014 266 ntBASIC3.71□□□□□ -1.82
COL1A1P02452 AC124856.1-201ENST00000600819 896 ntBASIC3.71□□□□□ -1.82
COL1A1P02452 AL137072.1-201ENST00000603444 466 ntBASIC3.71□□□□□ -1.82
COL1A1P02452 LINC00901.1-201ENST00000617252 152 ntBASIC3.71□□□□□ -1.82
COL1A1P02452 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
COL1A1P02452 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COL1A1P02452 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL1A1P02452 AC007390.2-201ENST00000606229 3803 ntBASIC3.7□□□□□ -1.82
COL1A1P02452 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COL1A1P02452 XKRY2-202ENST00000623874 1581 ntBASIC3.7□□□□□ -1.82
COL1A1P02452 XKRY-202ENST00000624960 1581 ntBASIC3.7□□□□□ -1.82
COL1A1P02452 RNU1-75P-201ENST00000347264 129 ntBASIC3.7□□□□□ -1.82
COL1A1P02452 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
COL1A1P02452 MIR137-201ENST00000385223 102 ntBASIC3.7□□□□□ -1.82
COL1A1P02452 SNORA48.8-201ENST00000391324 134 ntBASIC3.7□□□□□ -1.82
COL1A1P02452 RPL7P25-201ENST00000404151 721 ntBASIC3.7□□□□□ -1.82
COL1A1P02452 GTF2IP23-201ENST00000423746 351 ntBASIC3.7□□□□□ -1.82
COL1A1P02452 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.7□□□□□ -1.82
COL1A1P02452 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.7□□□□□ -1.82
COL1A1P02452 AC112492.1-201ENST00000449607 712 ntBASIC3.7□□□□□ -1.82
COL1A1P02452 AC006539.3-201ENST00000454258 129 ntBASIC3.7□□□□□ -1.82
COL1A1P02452 HMGN1P18-201ENST00000457642 277 ntBASIC3.7□□□□□ -1.82
COL1A1P02452 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.7□□□□□ -1.82
COL1A1P02452 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.7□□□□□ -1.82
COL1A1P02452 AC112184.1-201ENST00000505179 312 ntBASIC3.7□□□□□ -1.82
COL1A1P02452 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.7□□□□□ -1.82
COL1A1P02452 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.7□□□□□ -1.82
COL1A1P02452 RNU6-1231P-201ENST00000517185 103 ntBASIC3.7□□□□□ -1.82
COL1A1P02452 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.7□□□□□ -1.82
COL1A1P02452 AC135001.1-201ENST00000544546 283 ntBASIC3.7□□□□□ -1.82
COL1A1P02452 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.7□□□□□ -1.82
COL1A1P02452 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.7□□□□□ -1.82
COL1A1P02452 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.7□□□□□ -1.82
COL1A1P02452 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.7□□□□□ -1.82
COL1A1P02452 AC008121.2-201ENST00000614647 523 ntBASIC3.7□□□□□ -1.82
COL1A1P02452 AC073476.4-201ENST00000628409 72 ntBASIC3.7□□□□□ -1.82
COL1A1P02452 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.7□□□□□ -1.82
COL1A1P02452 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.7□□□□□ -1.82
COL1A1P02452 THAP12P8-201ENST00000447914 2115 ntBASIC3.7□□□□□ -1.82
COL1A1P02452 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.7□□□□□ -1.82
COL1A1P02452 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL1A1P02452 OR5J1P-201ENST00000313544 939 ntBASIC3.69□□□□□ -1.82
COL1A1P02452 AC062016.1-201ENST00000355719 319 ntBASIC3.69□□□□□ -1.82
COL1A1P02452 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
COL1A1P02452 RPS7P13-201ENST00000413955 498 ntBASIC3.69□□□□□ -1.82
COL1A1P02452 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.69□□□□□ -1.82
COL1A1P02452 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.69□□□□□ -1.82
COL1A1P02452 AC093156.1-201ENST00000440382 670 ntBASIC3.69□□□□□ -1.82
COL1A1P02452 AL135938.1-201ENST00000443141 297 ntBASIC3.69□□□□□ -1.82
COL1A1P02452 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.69□□□□□ -1.82
COL1A1P02452 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.69□□□□□ -1.82
COL1A1P02452 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.69□□□□□ -1.82
COL1A1P02452 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.69□□□□□ -1.82
COL1A1P02452 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL1A1P02452 AC093775.1-201ENST00000624154 1868 ntBASIC3.69□□□□□ -1.82
COL1A1P02452 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
COL1A1P02452 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
COL1A1P02452 RN7SKP285-201ENST00000410137 318 ntBASIC3.68□□□□□ -1.82
COL1A1P02452 RPL32P28-201ENST00000443577 397 ntBASIC3.68□□□□□ -1.82
COL1A1P02452 OR5H3P-201ENST00000502817 919 ntBASIC3.68□□□□□ -1.82
COL1A1P02452 AC104027.1-201ENST00000521887 300 ntBASIC3.68□□□□□ -1.82
COL1A1P02452 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.68□□□□□ -1.82
COL1A1P02452 AP001005.3-201ENST00000622049 129 ntBASIC3.68□□□□□ -1.82
COL1A1P02452 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.68□□□□□ -1.82
COL1A1P02452 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL1A1P02452 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL1A1P02452 MIR22-201ENST00000362190 85 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms