Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 SNORA51.4-201ENST00000364993 124 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 MIR7-3-201ENST00000384898 110 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 MIR200C-201ENST00000384980 68 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 RNU6-244P-201ENST00000391028 104 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 AL606490.7-201ENST00000433136 191 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 RRM2P4-201ENST00000441721 562 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 HSFY6P-201ENST00000445573 403 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 AC008264.1-201ENST00000447612 367 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.46□□□□□ -1.86
SHOX2O60902 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.46□□□□□ -1.86
SHOX2O60902 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.46□□□□□ -1.86
SHOX2O60902 AC023598.1-201ENST00000472521 361 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 AC098799.1-201ENST00000504752 800 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.46□□□□□ -1.86
SHOX2O60902 AC147055.1-201ENST00000509261 750 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 OR5H4P-201ENST00000510851 923 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 AC010285.3-201ENST00000511668 676 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 MTND4LP31-201ENST00000514859 294 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 AP001207.2-201ENST00000519490 539 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.46□□□□□ -1.86
SHOX2O60902 OR5D17P-201ENST00000531492 978 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 AP000619.3-201ENST00000535634 1127 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
SHOX2O60902 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.46□□□□□ -1.86
SHOX2O60902 OR4U1P-201ENST00000554958 912 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.46□□□□□ -1.86
SHOX2O60902 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.46□□□□□ -1.86
SHOX2O60902 AC067852.3-201ENST00000589177 561 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 RNU1-30P-201ENST00000606575 163 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.46□□□□□ -1.86
SHOX2O60902 XIST_intron.1-201ENST00000619444 68 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 AC112484.5-201ENST00000624189 228 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 AC015726.3-201ENST00000624501 418 ntBASIC3.46□□□□□ -1.86
SHOX2O60902 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SHOX2O60902 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SHOX2O60902 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SHOX2O60902 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SHOX2O60902 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SHOX2O60902 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.45□□□□□ -1.86
SHOX2O60902 DCAF13P1-201ENST00000495256 1330 ntBASIC3.45□□□□□ -1.86
SHOX2O60902 AL353743.4-201ENST00000422653 1547 ntBASIC3.45□□□□□ -1.86
SHOX2O60902 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SHOX2O60902 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SHOX2O60902 RNU6-317P-201ENST00000384031 107 ntBASIC3.45□□□□□ -1.86
SHOX2O60902 RNU6-185P-201ENST00000384421 107 ntBASIC3.45□□□□□ -1.86
SHOX2O60902 SNORA46-201ENST00000384762 135 ntBASIC3.45□□□□□ -1.86
SHOX2O60902 AL022722.2-201ENST00000402519 180 ntBASIC3.45□□□□□ -1.86
SHOX2O60902 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SHOX2O60902 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.45□□□□□ -1.86
SHOX2O60902 YY1P1-201ENST00000427625 668 ntBASIC3.45□□□□□ -1.86
SHOX2O60902 AC093151.1-201ENST00000427711 313 ntBASIC3.45□□□□□ -1.86
SHOX2O60902 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SHOX2O60902 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.45□□□□□ -1.86
SHOX2O60902 RPL7P19-201ENST00000469948 618 ntBASIC3.45□□□□□ -1.86
SHOX2O60902 SNX5P1-201ENST00000505757 1041 ntBASIC3.45□□□□□ -1.86
SHOX2O60902 RNU1-45P-201ENST00000517191 141 ntBASIC3.45□□□□□ -1.86
SHOX2O60902 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SHOX2O60902 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.45□□□□□ -1.86
SHOX2O60902 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.45□□□□□ -1.86
SHOX2O60902 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.45□□□□□ -1.86
SHOX2O60902 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.45□□□□□ -1.86
SHOX2O60902 AC084035.1-201ENST00000634543 607 ntBASIC3.45□□□□□ -1.86
SHOX2O60902 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SHOX2O60902 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SHOX2O60902 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.45□□□□□ -1.86
SHOX2O60902 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SHOX2O60902 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.44□□□□□ -1.86
SHOX2O60902 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.44□□□□□ -1.86
SHOX2O60902 AC138915.3-201ENST00000562908 1389 ntBASIC3.44□□□□□ -1.86
SHOX2O60902 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHOX2O60902 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.44□□□□□ -1.86
SHOX2O60902 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHOX2O60902 PPIAP31-201ENST00000405422 495 ntBASIC3.44□□□□□ -1.86
SHOX2O60902 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.44□□□□□ -1.86
SHOX2O60902 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHOX2O60902 AL031736.2-201ENST00000426573 787 ntBASIC3.44□□□□□ -1.86
SHOX2O60902 RPL37P1-201ENST00000432310 284 ntBASIC3.44□□□□□ -1.86
SHOX2O60902 MTCO1P52-201ENST00000433928 531 ntBASIC3.44□□□□□ -1.86
SHOX2O60902 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.44□□□□□ -1.86
SHOX2O60902 AC006326.1-201ENST00000445465 787 ntBASIC3.44□□□□□ -1.86
SHOX2O60902 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.44□□□□□ -1.86
SHOX2O60902 MTND2P8-201ENST00000450555 1025 ntBASIC3.44□□□□□ -1.86
SHOX2O60902 AC097262.1-201ENST00000452559 548 ntBASIC3.44□□□□□ -1.86
SHOX2O60902 MRPL35P4-201ENST00000453682 566 ntBASIC3.44□□□□□ -1.86
SHOX2O60902 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHOX2O60902 RPS7P7-201ENST00000463499 571 ntBASIC3.44□□□□□ -1.86
SHOX2O60902 AC021087.2-201ENST00000504656 1203 ntBASIC3.44□□□□□ -1.86
SHOX2O60902 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.44□□□□□ -1.86
SHOX2O60902 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.44□□□□□ -1.86
SHOX2O60902 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.44□□□□□ -1.86
SHOX2O60902 AC007179.3-201ENST00000604976 235 ntBASIC3.44□□□□□ -1.86
SHOX2O60902 AC107905.1-201ENST00000616204 426 ntBASIC3.44□□□□□ -1.86
SHOX2O60902 AP003355.3-201ENST00000623465 114 ntBASIC3.44□□□□□ -1.86
SHOX2O60902 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.44□□□□□ -1.86
SHOX2O60902 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHOX2O60902 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.44□□□□□ -1.86
SHOX2O60902 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHOX2O60902 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SHOX2O60902 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.43□□□□□ -1.86
SHOX2O60902 MIR372-201ENST00000362225 67 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms