Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
LMX1BO60663 AC009878.1-201ENST00000621819 340 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 AC073348.1-201ENST00000623002 331 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LMX1BO60663 AC011944.2-201ENST00000624440 683 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.89□□□□□ -1.79
LMX1BO60663 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.89□□□□□ -1.79
LMX1BO60663 AC055839.1-201ENST00000634467 498 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 PCMTD1P7-201ENST00000634506 357 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 AL392088.2-201ENST00000637607 285 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.89□□□□□ -1.79
LMX1BO60663 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.89□□□□□ -1.79
LMX1BO60663 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LMX1BO60663 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LMX1BO60663 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.89□□□□□ -1.79
LMX1BO60663 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
LMX1BO60663 AP000756.2-201ENST00000624168 2567 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 CPHL1P-201ENST00000461341 3407 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 RLIMP2-201ENST00000427891 1563 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.89□□□□□ -1.79
LMX1BO60663 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.89□□□□□ -1.79
LMX1BO60663 AC025031.4-201ENST00000621248 3271 ntBASIC3.89□□□□□ -1.79
LMX1BO60663 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LMX1BO60663 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.88□□□□□ -1.79
LMX1BO60663 AC005832.2-201ENST00000538921 1430 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.88□□□□□ -1.79
LMX1BO60663 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LMX1BO60663 ZNF137P-201ENST00000456718 1920 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 AC009951.1-201ENST00000623674 2614 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.88□□□□□ -1.79
LMX1BO60663 AL672167.1-206ENST00000356293 943 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 RN7SKP224-201ENST00000364140 325 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 RNU6-1320P-201ENST00000390838 107 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 RNU6-1269P-201ENST00000391139 107 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 AC104297.1-201ENST00000393779 870 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 OR6C69P-201ENST00000394268 893 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 VN1R8P-201ENST00000407739 893 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.88□□□□□ -1.79
LMX1BO60663 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.88□□□□□ -1.79
LMX1BO60663 RPS27AP12-201ENST00000429552 465 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.88□□□□□ -1.79
LMX1BO60663 RPL23AP25-201ENST00000430973 463 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.88□□□□□ -1.79
LMX1BO60663 SEPT7P5-201ENST00000434048 306 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 CBX1P1-201ENST00000440184 427 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.88□□□□□ -1.79
LMX1BO60663 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.88□□□□□ -1.79
LMX1BO60663 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.88□□□□□ -1.79
LMX1BO60663 AC104306.1-201ENST00000449702 371 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 TPMTP4-201ENST00000450749 678 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 RPL23AP24-201ENST00000458203 385 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 RNU6-599P-201ENST00000459383 107 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 RNU6-1193P-201ENST00000459461 107 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.88□□□□□ -1.79
LMX1BO60663 RPL7AP28-201ENST00000464513 571 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 NIP7P2-201ENST00000485801 544 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 AC109486.1-201ENST00000486833 374 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.88□□□□□ -1.79
LMX1BO60663 AC004069.2-201ENST00000505438 1114 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 AC109445.1-201ENST00000512356 383 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.88□□□□□ -1.79
LMX1BO60663 RNU6-1225P-201ENST00000516336 65 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 Y_RNA.695-201ENST00000516715 107 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 AC008694.2-201ENST00000517591 306 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.88□□□□□ -1.79
LMX1BO60663 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.88□□□□□ -1.79
LMX1BO60663 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.88□□□□□ -1.79
LMX1BO60663 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.88□□□□□ -1.79
LMX1BO60663 AP002963.1-201ENST00000530590 184 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.88□□□□□ -1.79
LMX1BO60663 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.88□□□□□ -1.79
LMX1BO60663 POLR2KP1-201ENST00000553226 168 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.88□□□□□ -1.79
LMX1BO60663 AC122134.1-201ENST00000565664 1104 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.88□□□□□ -1.79
LMX1BO60663 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.88□□□□□ -1.79
LMX1BO60663 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.88□□□□□ -1.79
LMX1BO60663 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.88□□□□□ -1.79
LMX1BO60663 AC008782.1-201ENST00000603386 430 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 AC010857.1-201ENST00000606398 594 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 Z98200.1-201ENST00000607298 470 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.88□□□□□ -1.79
LMX1BO60663 AC005332.10-201ENST00000612725 619 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 AC073968.1-201ENST00000618594 637 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 MIR7154-201ENST00000620673 73 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 RNU6-368P-201ENST00000620928 107 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 RNU6-538P-201ENST00000622329 107 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 AC006065.6-201ENST00000625201 545 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
LMX1BO60663 MFSD8-242ENST00000641690 4199 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 MAPK10-286ENST00000641208 8747 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
LMX1BO60663 AC011477.1-204ENST00000623416 1325 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LMX1BO60663 LINC00622-201ENST00000562811 1570 ntBASIC3.88□□□□□ -1.79
LMX1BO60663 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
LMX1BO60663 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LMX1BO60663 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.87□□□□□ -1.79
LMX1BO60663 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms