Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.86□□□□□ -1.79
SNX3O60493 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.86□□□□□ -1.79
SNX3O60493 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.86□□□□□ -1.79
SNX3O60493 PHBP16-201ENST00000446318 950 ntBASIC3.86□□□□□ -1.79
SNX3O60493 AL162388.1-201ENST00000450912 352 ntBASIC3.86□□□□□ -1.79
SNX3O60493 BX276092.4-201ENST00000452056 248 ntBASIC3.86□□□□□ -1.79
SNX3O60493 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.86□□□□□ -1.79
SNX3O60493 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.86□□□□□ -1.79
SNX3O60493 RN7SL98P-201ENST00000462271 300 ntBASIC3.86□□□□□ -1.79
SNX3O60493 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
SNX3O60493 RPL35P6-201ENST00000490024 372 ntBASIC3.86□□□□□ -1.79
SNX3O60493 PRELID3BP7-201ENST00000503606 469 ntBASIC3.86□□□□□ -1.79
SNX3O60493 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.86□□□□□ -1.79
SNX3O60493 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.86□□□□□ -1.79
SNX3O60493 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.86□□□□□ -1.79
SNX3O60493 ARL2BPP6-201ENST00000512757 439 ntBASIC3.86□□□□□ -1.79
SNX3O60493 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.86□□□□□ -1.79
SNX3O60493 AC008489.1-201ENST00000524271 483 ntBASIC3.86□□□□□ -1.79
SNX3O60493 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SNX3O60493 OR5D15P-201ENST00000531671 942 ntBASIC3.86□□□□□ -1.79
SNX3O60493 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.86□□□□□ -1.79
SNX3O60493 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.86□□□□□ -1.79
SNX3O60493 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.86□□□□□ -1.79
SNX3O60493 MIR4425-201ENST00000580572 84 ntBASIC3.86□□□□□ -1.79
SNX3O60493 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SNX3O60493 CCDC58P3-201ENST00000590792 430 ntBASIC3.86□□□□□ -1.79
SNX3O60493 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.86□□□□□ -1.79
SNX3O60493 AC021749.1-201ENST00000604322 607 ntBASIC3.86□□□□□ -1.79
SNX3O60493 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.86□□□□□ -1.79
SNX3O60493 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.86□□□□□ -1.79
SNX3O60493 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.86□□□□□ -1.79
SNX3O60493 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.86□□□□□ -1.79
SNX3O60493 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SNX3O60493 AC117529.2-201ENST00000512159 2068 ntBASIC3.86□□□□□ -1.79
SNX3O60493 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
SNX3O60493 ELL2P4-201ENST00000446870 1376 ntBASIC3.86□□□□□ -1.79
SNX3O60493 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.86□□□□□ -1.79
SNX3O60493 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
SNX3O60493 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.86□□□□□ -1.79
SNX3O60493 MFSD8-220ENST00000641243 1422 ntBASIC3.86□□□□□ -1.79
SNX3O60493 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SNX3O60493 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.86□□□□□ -1.79
SNX3O60493 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SNX3O60493 AC090229.1-201ENST00000590983 1609 ntBASIC3.85□□□□□ -1.79
SNX3O60493 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNX3O60493 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNX3O60493 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SNX3O60493 NACA3P-201ENST00000359690 648 ntBASIC3.85□□□□□ -1.79
SNX3O60493 SNORA60-201ENST00000362396 134 ntBASIC3.85□□□□□ -1.79
SNX3O60493 RNU6-251P-201ENST00000363235 104 ntBASIC3.85□□□□□ -1.79
SNX3O60493 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SNX3O60493 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNX3O60493 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SNX3O60493 RNU6-413P-201ENST00000384115 107 ntBASIC3.85□□□□□ -1.79
SNX3O60493 RNU6-636P-201ENST00000384598 107 ntBASIC3.85□□□□□ -1.79
SNX3O60493 ANAPC10P1-201ENST00000395991 556 ntBASIC3.85□□□□□ -1.79
SNX3O60493 ERHP2-201ENST00000402323 299 ntBASIC3.85□□□□□ -1.79
SNX3O60493 RN7SKP182-201ENST00000410772 298 ntBASIC3.85□□□□□ -1.79
SNX3O60493 AC073264.1-201ENST00000411508 416 ntBASIC3.85□□□□□ -1.79
SNX3O60493 AC069218.2-201ENST00000411665 344 ntBASIC3.85□□□□□ -1.79
SNX3O60493 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.85□□□□□ -1.79
SNX3O60493 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.85□□□□□ -1.79
SNX3O60493 RBMY2KP-201ENST00000418221 992 ntBASIC3.85□□□□□ -1.79
SNX3O60493 AC092634.6-201ENST00000418558 192 ntBASIC3.85□□□□□ -1.79
SNX3O60493 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.85□□□□□ -1.79
SNX3O60493 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.85□□□□□ -1.79
SNX3O60493 AC008072.1-201ENST00000434254 824 ntBASIC3.85□□□□□ -1.79
SNX3O60493 AL627308.1-201ENST00000435693 821 ntBASIC3.85□□□□□ -1.79
SNX3O60493 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.85□□□□□ -1.79
SNX3O60493 USP9YP22-201ENST00000438971 294 ntBASIC3.85□□□□□ -1.79
SNX3O60493 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.85□□□□□ -1.79
SNX3O60493 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.85□□□□□ -1.79
SNX3O60493 RN7SL481P-201ENST00000477764 299 ntBASIC3.85□□□□□ -1.79
SNX3O60493 AC005726.1-201ENST00000494679 427 ntBASIC3.85□□□□□ -1.79
SNX3O60493 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.85□□□□□ -1.79
SNX3O60493 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.85□□□□□ -1.79
SNX3O60493 BOLA3P3-201ENST00000505182 232 ntBASIC3.85□□□□□ -1.79
SNX3O60493 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.85□□□□□ -1.79
SNX3O60493 AC114322.1-201ENST00000506771 926 ntBASIC3.85□□□□□ -1.79
SNX3O60493 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.85□□□□□ -1.79
SNX3O60493 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.85□□□□□ -1.79
SNX3O60493 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.85□□□□□ -1.79
SNX3O60493 AC092593.2-201ENST00000513866 913 ntBASIC3.85□□□□□ -1.79
SNX3O60493 RNU6-311P-201ENST00000516224 102 ntBASIC3.85□□□□□ -1.79
SNX3O60493 SNORA48.10-201ENST00000516965 160 ntBASIC3.85□□□□□ -1.79
SNX3O60493 RN7SKP234-201ENST00000517173 224 ntBASIC3.85□□□□□ -1.79
SNX3O60493 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.85□□□□□ -1.79
SNX3O60493 AC087808.1-201ENST00000520501 361 ntBASIC3.85□□□□□ -1.79
SNX3O60493 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.85□□□□□ -1.79
SNX3O60493 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.85□□□□□ -1.79
SNX3O60493 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.85□□□□□ -1.79
SNX3O60493 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.85□□□□□ -1.79
SNX3O60493 AADACP1-206ENST00000561502 1193 ntBASIC3.85□□□□□ -1.79
SNX3O60493 AP001180.3-201ENST00000582221 145 ntBASIC3.85□□□□□ -1.79
SNX3O60493 YWHAQP7-201ENST00000603536 658 ntBASIC3.85□□□□□ -1.79
SNX3O60493 AC010680.4-201ENST00000605334 543 ntBASIC3.85□□□□□ -1.79
SNX3O60493 AC023158.2-201ENST00000614876 543 ntBASIC3.85□□□□□ -1.79
SNX3O60493 AC006963.1-201ENST00000624003 1052 ntBASIC3.85□□□□□ -1.79
SNX3O60493 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.85□□□□□ -1.79
SNX3O60493 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 362.3 ms