Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.82□□□□□ -1.32
HOXA2O43364 VN1R104P-201ENST00000505115 1009 ntBASIC6.82□□□□□ -1.32
HOXA2O43364 RNU6-408P-201ENST00000515910 100 ntBASIC6.82□□□□□ -1.32
HOXA2O43364 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.82□□□□□ -1.32
HOXA2O43364 FAM60DP-201ENST00000524174 632 ntBASIC6.82□□□□□ -1.32
HOXA2O43364 AP000859.1-201ENST00000525536 307 ntBASIC6.82□□□□□ -1.32
HOXA2O43364 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.82□□□□□ -1.32
HOXA2O43364 AC016727.2-201ENST00000603988 621 ntBASIC6.82□□□□□ -1.32
HOXA2O43364 SNORD91A-202ENST00000609620 191 ntBASIC6.82□□□□□ -1.32
HOXA2O43364 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC6.82□□□□□ -1.32
HOXA2O43364 SNX18P12-201ENST00000624821 759 ntBASIC6.82□□□□□ -1.32
HOXA2O43364 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.82□□□□□ -1.32
HOXA2O43364 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXA2O43364 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
HOXA2O43364 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.82□□□□□ -1.32
HOXA2O43364 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HOXA2O43364 AL589993.1-201ENST00000407450 2524 ntBASIC6.82□□□□□ -1.32
HOXA2O43364 MTCO1P24-201ENST00000515438 1558 ntBASIC6.82□□□□□ -1.32
HOXA2O43364 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.82□□□□□ -1.32
HOXA2O43364 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXA2O43364 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HOXA2O43364 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HOXA2O43364 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXA2O43364 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXA2O43364 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
HOXA2O43364 AL359976.1-201ENST00000418655 3528 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
HOXA2O43364 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXA2O43364 AC032011.1-201ENST00000611703 1549 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXA2O43364 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXA2O43364 AL445437.1-201ENST00000623157 3087 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXA2O43364 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXA2O43364 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXA2O43364 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXA2O43364 RNU1-35P-201ENST00000362782 153 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 RNU6-450P-201ENST00000364654 107 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 Y_RNA.380-201ENST00000365663 111 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HOXA2O43364 SNORA24.1-201ENST00000384401 135 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 RNU6-713P-201ENST00000384761 107 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 Y_RNA.594-201ENST00000410373 140 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 UBE2V1P14-201ENST00000415815 558 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXA2O43364 EIF4EP1-201ENST00000422311 642 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXA2O43364 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXA2O43364 AC236972.1-201ENST00000433225 199 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 AC092013.1-201ENST00000438795 332 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 HMGB3P30-201ENST00000457863 606 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 SCARNA18-201ENST00000459004 134 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 RPL21P8-201ENST00000465083 535 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 AL136126.1-201ENST00000473603 402 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXA2O43364 Y_RNA.670-201ENST00000516255 105 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 RNU6-406P-201ENST00000516470 107 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.81□□□□□ -1.32
HOXA2O43364 AL049779.2-201ENST00000553847 315 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXA2O43364 AC106782.4-201ENST00000568264 210 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 AC024619.4-201ENST00000580924 316 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC6.81□□□□□ -1.32
HOXA2O43364 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXA2O43364 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC6.81□□□□□ -1.32
HOXA2O43364 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXA2O43364 AC092447.9-201ENST00000603395 144 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 AL031320.1-201ENST00000604177 357 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 AC018462.2-201ENST00000605375 395 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 MIR6862-1-201ENST00000613016 70 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 MIR6862-2-201ENST00000614755 70 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 MPP6-209ENST00000625307 126 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXA2O43364 MIR4302-201ENST00000638058 60 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HOXA2O43364 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXA2O43364 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
HOXA2O43364 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXA2O43364 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
HOXA2O43364 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXA2O43364 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXA2O43364 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
HOXA2O43364 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXA2O43364 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HOXA2O43364 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXA2O43364 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.81□□□□□ -1.32
HOXA2O43364 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HOXA2O43364 AL596244.1-201ENST00000567068 3779 ntBASIC6.81□□□□□ -1.32
HOXA2O43364 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
HOXA2O43364 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
HOXA2O43364 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.8□□□□□ -1.32
HOXA2O43364 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXA2O43364 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXA2O43364 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.8□□□□□ -1.32
HOXA2O43364 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXA2O43364 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXA2O43364 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
HOXA2O43364 RN7SKP78-201ENST00000364711 318 ntBASIC6.8□□□□□ -1.32
HOXA2O43364 RNU6-823P-201ENST00000391042 103 ntBASIC6.8□□□□□ -1.32
HOXA2O43364 RNU2-36P-201ENST00000410361 191 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms