Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SDCBPO00560 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SDCBPO00560 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SDCBPO00560 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SDCBPO00560 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.72□□□□□ -1.97
SDCBPO00560 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
SDCBPO00560 AC234772.1-201ENST00000377927 937 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 SNORA70E-201ENST00000384492 135 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 MIR134-201ENST00000385258 73 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 MIR320B1-201ENST00000390209 79 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 BX323014.1-201ENST00000412876 237 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 HSFY4P-201ENST00000415994 1181 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 AC245052.5-201ENST00000416320 649 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 OR1AA1P-201ENST00000419597 916 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC2.72□□□□□ -1.97
SDCBPO00560 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.72□□□□□ -1.97
SDCBPO00560 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.72□□□□□ -1.97
SDCBPO00560 AL157884.3-201ENST00000448273 1184 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 TVP23BP2-201ENST00000455082 615 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 SNORD108-201ENST00000459332 71 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 RN7SL75P-201ENST00000461926 281 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 AC012170.1-201ENST00000495139 359 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 SAP18P1-201ENST00000512058 390 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.72□□□□□ -1.97
SDCBPO00560 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SDCBPO00560 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.72□□□□□ -1.97
SDCBPO00560 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.72□□□□□ -1.97
SDCBPO00560 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.72□□□□□ -1.97
SDCBPO00560 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.72□□□□□ -1.97
SDCBPO00560 AC034105.4-201ENST00000568304 277 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.72□□□□□ -1.97
SDCBPO00560 AC010615.3-201ENST00000597319 394 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 AC007687.1-201ENST00000602704 304 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 AP003117.1-201ENST00000602771 554 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 AC092354.2-201ENST00000607786 514 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 AL391834.1-201ENST00000609609 560 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 AL157817.1-201ENST00000614264 790 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 MIR8058-201ENST00000615737 89 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 AL355365.1-201ENST00000616480 294 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 AL079305.1-201ENST00000623159 3008 ntBASIC2.72□□□□□ -1.97
SDCBPO00560 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.72□□□□□ -1.97
SDCBPO00560 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
SDCBPO00560 AC093831.2-201ENST00000624393 3427 ntBASIC2.71□□□□□ -1.97
SDCBPO00560 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SDCBPO00560 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SDCBPO00560 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SDCBPO00560 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.71□□□□□ -1.98
SDCBPO00560 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.71□□□□□ -1.98
SDCBPO00560 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SDCBPO00560 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
SDCBPO00560 FABP12P1-201ENST00000401911 322 ntBASIC2.71□□□□□ -1.98
SDCBPO00560 RNA5SP229-201ENST00000410809 99 ntBASIC2.71□□□□□ -1.98
SDCBPO00560 AC245054.2-201ENST00000415639 319 ntBASIC2.71□□□□□ -1.98
SDCBPO00560 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.71□□□□□ -1.98
SDCBPO00560 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.71□□□□□ -1.98
SDCBPO00560 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.71□□□□□ -1.98
SDCBPO00560 AC122718.1-201ENST00000439448 744 ntBASIC2.71□□□□□ -1.98
SDCBPO00560 HMGB3P6-201ENST00000444896 598 ntBASIC2.71□□□□□ -1.98
SDCBPO00560 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.71□□□□□ -1.98
SDCBPO00560 CYCSP35-201ENST00000451978 304 ntBASIC2.71□□□□□ -1.98
SDCBPO00560 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.71□□□□□ -1.98
SDCBPO00560 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.71□□□□□ -1.98
SDCBPO00560 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.71□□□□□ -1.98
SDCBPO00560 RPL21P10-201ENST00000463521 490 ntBASIC2.71□□□□□ -1.98
SDCBPO00560 FAM133DP-201ENST00000464802 691 ntBASIC2.71□□□□□ -1.98
SDCBPO00560 RPL7P38-201ENST00000488396 739 ntBASIC2.71□□□□□ -1.98
SDCBPO00560 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.71□□□□□ -1.98
SDCBPO00560 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC2.71□□□□□ -1.98
SDCBPO00560 CCNHP1-201ENST00000513311 678 ntBASIC2.71□□□□□ -1.98
SDCBPO00560 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.71□□□□□ -1.98
SDCBPO00560 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.71□□□□□ -1.98
SDCBPO00560 IGHV3-76-201ENST00000522465 295 ntBASIC2.71□□□□□ -1.98
SDCBPO00560 AC022790.1-201ENST00000522872 204 ntBASIC2.71□□□□□ -1.98
SDCBPO00560 AC011611.1-201ENST00000552179 197 ntBASIC2.71□□□□□ -1.98
SDCBPO00560 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.71□□□□□ -1.98
SDCBPO00560 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.71□□□□□ -1.98
SDCBPO00560 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.71□□□□□ -1.98
SDCBPO00560 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC2.71□□□□□ -1.98
SDCBPO00560 AL109618.2-201ENST00000605527 211 ntBASIC2.71□□□□□ -1.98
SDCBPO00560 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.71□□□□□ -1.98
SDCBPO00560 AC099778.2-201ENST00000610904 211 ntBASIC2.71□□□□□ -1.98
SDCBPO00560 AC243654.2-201ENST00000612843 443 ntBASIC2.71□□□□□ -1.98
SDCBPO00560 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
SDCBPO00560 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.71□□□□□ -1.98
SDCBPO00560 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SDCBPO00560 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SDCBPO00560 AF127577.6-201ENST00000623352 2191 ntBASIC2.71□□□□□ -1.98
SDCBPO00560 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.71□□□□□ -1.98
SDCBPO00560 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SDCBPO00560 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.71□□□□□ -1.98
SDCBPO00560 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SDCBPO00560 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.7□□□□□ -1.98
SDCBPO00560 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.7□□□□□ -1.98
SDCBPO00560 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SDCBPO00560 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SDCBPO00560 RNU6-532P-201ENST00000384318 107 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 SNORA46-201ENST00000384762 135 ntBASIC2.7□□□□□ -1.98
SDCBPO00560 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SDCBPO00560 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms